Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00237 ATGCAGCGCGGGGCGTTGAGAGGTTTATATAGAATGACAGTGTTTGCCAAACTCACGTTCATCATTCATTCTCTTCCTCTCTGTCTCTCTGTAGAGCCGCAGTTGATTTTGGAAGCGATGTCGCACCGGAAGTTCGAGCACCCGAGGCACGGTTCCCTTGGATTTCTCCCAAGGAAGCGAGCTTCTCGTCATCGTGGAAAGGTGAAGGCTTTCCCAAAAGACAATCCTAGTCAACCATGCAGGTTGACTGCCTTTGTGGGTTATAAGTCTGGAATGACCCACATTGTTAGAGAGGTTGAGAAACCTGGATCAAAACTTCATAAGAAAGAGACATGTGAAGCTGTCACTATCATTGAAACACCTCCATTGGTTGTTGTTGGAGTGGTGGGATATGTAAAGACACCTCGTGGCTTTCGTACACTCAATACTATTTGGGCTCAGCATCTAAGTGAAGAAGTCAAGAGACGATTTTACAAGAACTGGTGCAAATCCAAAAAGAAGGCTTTTACCAAATATACAAAAAAATATGAAACTGATGAAGGAAAGGAAAATATTAAATGTCAACTTGAGAAATTGAAGAAGTATTCAACTGTCATTCGTGTTCTCGCTCATACTCAGATAAGGAAGTTGAAAGGTCTGAAACAGAAGAAAGCACATTTGATGGAGATCCAAGTTAATGGTGGAACAGTAGAACAGAAGGTGGACTACGCATATAGCTTCTTTGAAAAGCAAATCCCAGTGGATGCTGTTTTCCAAAAAGATGAGATGATTGACATCATTGGTGTGACAAAGGGTAAGGGTTATGAAGGTGTTGTAACTCGTTGGGGTGTTACTCGACTCCCTCGCAAGACTCACAGAGGTCTAAGGAAGGTTGCTTGTATTGGTGCCTGGCATCCTGCTCGTGTTTCTTTCACTGTTGCCAGGGCTGGTCAGAATGGTTATCATCATCGAACGGAGTTGAATAAAAAGATCTACAAAGTTGCGAAGACCGGTCAAGAGTCACATACTGCCATCACCGAATTTGACAGGACTGAGAAGGATATTACTCCTATGGGTGGATTCCCACATTATGGAGTGGTGAAGGATGATTACATTATGGTGAAGGGATGCTGTGTTGGGCCCAAGAAGAGGGTTCTCACTCTTCGTCAGTCACTTCTCAAGCAGACATCTCGAGTGGCTCTTGAAGAGATCAAACTGAAGTTCATTGACACCTCATCCAAGTTTGGACATGGCCGCTTCCAGACCACTCAGGAGAAACAAAAGTTTTATGGTCGATTGAAGGCATAA 1287 0.4375 MQRGALRGLYRMTVFAKLTFIIHSLPLCLSVEPQLILEAMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCRLTAFVGYKSGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGFRTLNTIWAQHLSEEVKRRFYKNWCKSKKKAFTKYTKKYETDEGKENIKCQLEKLKKYSTVIRVLAHTQIRKLKGLKQKKAHLMEIQVNGGTVEQKVDYAYSFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVAKTGQESHTAITEFDRTEKDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVLTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00237 428 FunFam Ribosomal protein L3 304 428 - -
Spst11g00237 428 Gene3D Translation factors 83 424 - -
Spst11g00237 428 Gene3D - 122 246 - -
Spst11g00237 428 FunFam 60S ribosomal protein L3 265 313 - -
Spst11g00237 428 ProSitePatterns Ribosomal protein L3 signature. 251 274 IPR019926 -
Spst11g00237 428 FunFam 60S ribosomal protein L3 122 246 - -
Spst11g00237 428 Pfam Ribosomal protein L3 40 409 IPR000597 GO:0003735|GO:0005840|GO:0006412
Spst11g00237 428 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 40 423 IPR045077 GO:0003735|GO:0005840|GO:0006412
Spst11g00237 428 SUPERFAMILY Translation proteins 43 409 IPR009000 -
Spst11g00237 428 FunFam 60S ribosomal protein L3 40 116 - -
Spst11g00237 428 Gene3D Ribosomal protein L3, domain 3 40 313 IPR044892 -
Spst11g00237 428 FunFam 60S ribosomal protein L3 83 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00237 Spst-Chr11 7871924 7875212 Dispersed