Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00224 ATGTCTAGTCGTTCCTGTCCCTGCAAGTGTTTGGCTGCGGATACACTTGCTTATCTTTTATTTCACGCCTCTCTAATCGAATTTCCAGTTACTTTGGCAAGCCACCTAGCTGCAACTACTTGTGGCAGTGAGGCTAGAAAGAAAAGGGACATGAAACTGGTTGTGGAGGTTATTAATGCTCATGATCTTATGCCAAAAGATGGTGAAGGATCAGCCAGTGCCTTTGTGGAAGTAGACTTTGAAAACCAGCTTAGCCGAACTAGAACTGTCCCAAAGAACCTCAACCCCACCTGGAACCAAAAACTAGTCTTCCATTTGGATGCAACCAAACCTTACCATCGCCAAACTATTGAAGTATCCGTCTACAACGAGAGGAGACTTACTCCAGGAAGAAACTTCCTTGGAAGGGTGAGAATTCCTTGCTCCAACATTGTCAAGGAAGGTGAAGAGGTGTATCAGATTTTCCCACTTGAAAAGAAATGGTTTCTCTCACCTGTTAAGGGTGAAATTGGCCTCAAAATATACATTGCATCAGAGTCCAATTCCAAACCAAAACCTCTTTCTCCTGTTTTCCCTTCAGAACAAAAAAAACTCCCACCTTCTACTCCACTCAAAGCACCAGAATCAACAACGAGTACTACCCTTCCTCTTCCTCATACTATTCCCTCGTACAGAACAGCATTAGAAGCTGGTTCCATTGAAGACCTTCCTGCAATTGACACCCCAAAATCAATTACAGAAGAAGCAGAAGTATATTCTGGTGCAGAAGTTCGGTCTAGTGGCGTTGATATCGATCAGGAGCCAAAGAAAGAAAGCAGAGAAACTGTGCTAGAGACAACCCAACAACTAGACAAGCACCAAGTTCTCCAGCCTCAGATGATTTCAGTAAAGAGAAGACCACCAGGTACTCCATCCGCCATGCACTCAGTTGATCCTCAAGTCCAATCTAGTCATCATGAAAACTATAATCACAATGACACCAATCCACAGCCTAGGATTTCAATAAAGAGGCGACCACAAGCACAAGGTACTCCTTTCACAATGCACTCAGTTGATCCACAAGTTCAACCAAATCATGGTGAAGGCTACAATCGCAATGACACAAACCAGCAGCCAAGAATTTCAATTAAGAGACGACCACGAGGACCCGGTACTCCATCACCAATGCACTCCTTTAATCCACAAGTCCGTGCTAGCTATGATGAAGCCTACAACCTCATGGGAACCAATCCACAACAGCCAAGAATTTTAGTAGAGAGACAACAACAGAATACTCCACTCACCACGCACCAAGTTAGTCCCCAAGTCCCTACTAGCAATGATGAAAACTACAATCTCAATGACACCAATGCACATCTTGGCGAACGTTGGCCTAGTGGTGGAGCTTACGGTAGAAGAGGGTGGATGAGTGGCAGCGACCGATTCACTAGCACTTATGACCTTGTTGAGCAGATGTATTATCTGTATGTTCGTGTTGTGAAGGCGAAAGATCTCCCCCCAAGCACCATCACCTCAAGTTGCGATCCTTATGTGGAAGTGAAGCTGGGGAACTACAAGGGAAGAACAAAGCACTTTGATAGGAAATTGCACCCAGAGTGGAATCAAGTGTTTGCTTTTTCCAAAGACCGCATTCAGTCTTCTGTTTTAGAAGTCTTTGTGAAAGATAAAGCAATGGTAGGGAGAGATGACTATCTTGGAAGGGTGGTTTTTGACCTCAATGAGGTTCCAACAAGAGTTCCACCAGATAGTCCGCTAGCTCCTCAGTGGTACCGGCTTGAAGACTGGCGTGAAGAAGGCAAGGTGAGGGGTGACATTATGCTTGCAGTTTGGATGGGAACACAAGCTGATGAGGCTTTCTCAGATGCTTGGCATTCTGATGCTGCCATTGTCTATGGAGAGGGTGTTTTCAACATCAGATCAAAGGTATACATGTCACCAAAACTGTGGTATCTCAGGGTGAATGTCATTGAAGCGCAAGATGTAATACCGGGTGACAGAAACCGCCTACCGGAGGTTTTTGTGAAAGCTCAAGTGGGCTGCCAAGTGCTGACAACCAAGATATGCCCCACCAGAACAACCACCCCATTTTGGAATGAAGATTTGGTTTTTGTAGCCTGTGAGCCATTTGAGGAGCAACTGACAATCACTGTGGAGGATCGTGTGCACCCTTCAAAAGATGAGGTACTTGGGAAGATAAGCCTACCAATGTCCCTCTTTGAGAAGCGGTTAGACCACAGGCCAGTTCATTCGCGCTGGTTCAATCTAGAGAAATTTGGCTTTGGAATACTAGAAGGTGATAGAAGAAATGAACTCAAGTTTTCGAGCAGGATTCACATGAGAGTATGCCTTGAAGGTGGATACCATGTCCTTGATGAGTCCACATTGTACAGTAGTGATCAAAGACCAACAGCGAGACAGCTATGGAAGCAACCTATTGGGATACTTGAAGTAGGTATCTTAGGAGCACAAGGGCTTCTCCCTATGAAGATGAGGGATGGCAGAGGCAGCACAGATGCATACTGTGTTGCCAAGTATGGTCAGAAATGGGTCAGAACCAGAACACTGCTTGACACGTTTAGTCCTAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCACTGTGATAACATTGGGTGTTTTTGACAACTGCCATCTAGGTGGAGGAGAAAAAGCTCCTGGTAGCAATGTGGCCAGAGATTCTCGGATTGGAAAGGTAAGAATAAGGCTATCAACACTTGAAGCTAATAGAATTTACACCAGTTCTCACCCTCTTCTTGTTCTGCACCCACATGGAGTTAAGAAGATGGGAGAGCTTCAGTTATCAGTGAGGTTCACAGCACTCTCCCTAGTTAACATGGTTCATATCTATGGCCAACCTTTGCTTCCGAAGATTCATTACATACATCCTTTCACAGTTAACCAAATAGACAACTTAAGGTACCAAGCAATGAACATTGTGGCTGCGAGGCTAGGCCGAGCCGAACCGCCTCTGAGGAAGGAAGTGGTGGAGTACATGTTGGATGTTGATTCCCATATGTGGAGCATGAGAAGAAGCAAGGCTAACTTCTTCCGCATTATGTCACTTTTCTCGGGTATGCTCACAATGGGAAAGTGGTTCAGTGATGTTTGCCTTTGGAAGAACCATGTTACATCAATCCTAGTTCACATTCTCTTCCTTATACTGATATGGTACCCGGAATTGATCCTACCAACAGTGTTTCTGTACATGTTCTTGATTGGTCTCTGGAACTACAGGTTCCGGCCAAGACACCCTCCTCACATGGATACTAAACTCTCCTGGGCTGAAGCTGTTCATCCGGACGAACTCGATGAAGAGTTCGACACATTTCCAACTTCTAGATCACAAGATGTTGTGAGAATGAGGTATGACAGGCTTAGAACTGTGGCAGGTAGGATTCAGACAGTTGTTGGGGACATAGCTACACAAGGGGAGCGGTTTCAGTCTCTACTGAGTTGGAGAGACCCTAGAGCAACCAGCCTCTTTGTAGTGTTTAGCTTTTGTGCTGCTGTGACTCTCTATGCAACACCATTCAGAGTGGTGGCTCTGGTTACAGGTTTGTACTTTCTGAGACATCCAAGGTTTAGGAGCAAGCTGCCTTCAGTACCAAGTAATTTCTTCAAGAGGCTCCCAGCTAGAACAGATAGTTTACTGTGA 3684 0.4514 MSSRSCPCKCLAADTLAYLLFHASLIEFPVTLASHLAATTCGSEARKKRDMKLVVEVINAHDLMPKDGEGSASAFVEVDFENQLSRTRTVPKNLNPTWNQKLVFHLDATKPYHRQTIEVSVYNERRLTPGRNFLGRVRIPCSNIVKEGEEVYQIFPLEKKWFLSPVKGEIGLKIYIASESNSKPKPLSPVFPSEQKKLPPSTPLKAPESTTSTTLPLPHTIPSYRTALEAGSIEDLPAIDTPKSITEEAEVYSGAEVRSSGVDIDQEPKKESRETVLETTQQLDKHQVLQPQMISVKRRPPGTPSAMHSVDPQVQSSHHENYNHNDTNPQPRISIKRRPQAQGTPFTMHSVDPQVQPNHGEGYNRNDTNQQPRISIKRRPRGPGTPSPMHSFNPQVRASYDEAYNLMGTNPQQPRILVERQQQNTPLTTHQVSPQVPTSNDENYNLNDTNAHLGERWPSGGAYGRRGWMSGSDRFTSTYDLVEQMYYLYVRVVKAKDLPPSTITSSCDPYVEVKLGNYKGRTKHFDRKLHPEWNQVFAFSKDRIQSSVLEVFVKDKAMVGRDDYLGRVVFDLNEVPTRVPPDSPLAPQWYRLEDWREEGKVRGDIMLAVWMGTQADEAFSDAWHSDAAIVYGEGVFNIRSKVYMSPKLWYLRVNVIEAQDVIPGDRNRLPEVFVKAQVGCQVLTTKICPTRTTTPFWNEDLVFVACEPFEEQLTITVEDRVHPSKDEVLGKISLPMSLFEKRLDHRPVHSRWFNLEKFGFGILEGDRRNELKFSSRIHMRVCLEGGYHVLDESTLYSSDQRPTARQLWKQPIGILEVGILGAQGLLPMKMRDGRGSTDAYCVAKYGQKWVRTRTLLDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGGGEKAPGSNVARDSRIGKVRIRLSTLEANRIYTSSHPLLVLHPHGVKKMGELQLSVRFTALSLVNMVHIYGQPLLPKIHYIHPFTVNQIDNLRYQAMNIVAARLGRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLFSGMLTMGKWFSDVCLWKNHVTSILVHILFLILIWYPELILPTVFLYMFLIGLWNYRFRPRHPPHMDTKLSWAEAVHPDELDEEFDTFPTSRSQDVVRMRYDRLRTVAGRIQTVVGDIATQGERFQSLLSWRDPRATSLFVVFSFCAAVTLYATPFRVVALVTGLYFLRHPRFRSKLPSVPSNFFKRLPARTDSLL 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00224 1227 CDD C2B_MCTP_PRT_plant 487 613 IPR047257 -
Spst11g00224 1227 Gene3D C2 domain 637 781 IPR035892 -
Spst11g00224 1227 MobiDBLite consensus disorder prediction 296 394 - -
Spst11g00224 1227 CDD C2A_MCTP_PRT_plant 52 178 - -
Spst11g00224 1227 CDD C2C_MCTP_PRT_plant 650 802 IPR047258 -
Spst11g00224 1227 Pfam C2 domain 813 927 IPR000008 -
Spst11g00224 1227 Pfam C2 domain 52 156 IPR000008 -
Spst11g00224 1227 Pfam C2 domain 487 590 IPR000008 -
Spst11g00224 1227 Pfam C2 domain 649 755 IPR000008 -
Spst11g00224 1227 FunFam C2 domain-containing protein 796 951 - -
Spst11g00224 1227 ProSiteProfiles C2 domain profile. 32 155 IPR000008 -
Spst11g00224 1227 ProSiteProfiles C2 domain profile. 796 925 IPR000008 -
Spst11g00224 1227 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 649 804 IPR035892 -
Spst11g00224 1227 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 486 627 IPR035892 -
Spst11g00224 1227 MobiDBLite consensus disorder prediction 308 375 - -
Spst11g00224 1227 CDD C2D_MCTP_PRT_plant 814 944 IPR047255 -
Spst11g00224 1227 ProSiteProfiles C2 domain profile. 632 753 IPR000008 -
Spst11g00224 1227 FunFam C2 domain-containing protein 482 628 - -
Spst11g00224 1227 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 813 949 IPR035892 -
Spst11g00224 1227 Pfam Plant phosphoribosyltransferase C-terminal 1072 1227 IPR013583 -
Spst11g00224 1227 MobiDBLite consensus disorder prediction 181 219 - -
Spst11g00224 1227 FunFam C2 domain-containing protein 636 783 - -
Spst11g00224 1227 MobiDBLite consensus disorder prediction 204 219 - -
Spst11g00224 1227 Gene3D C2 domain 788 948 IPR035892 -
Spst11g00224 1227 SMART C2_3c 52 153 IPR000008 -
Spst11g00224 1227 SMART C2_3c 814 924 IPR000008 -
Spst11g00224 1227 SMART C2_3c 650 748 IPR000008 -
Spst11g00224 1227 SMART C2_3c 487 584 IPR000008 -
Spst11g00224 1227 ProSiteProfiles C2 domain profile. 469 590 IPR000008 -
Spst11g00224 1227 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 52 178 IPR035892 -
Spst11g00224 1227 Gene3D C2 domain 46 197 IPR035892 -
Spst11g00224 1227 Gene3D C2 domain 482 627 IPR035892 -
Spst11g00224 1227 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 52 1227 IPR047259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00224 Spst-Chr11 7699711 7704877 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00224 11 7699711 7704877 Spst11g00224 11 7699711 7704877 ECH