Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00200 GATTTGACAACTGAGGAGGGTTTTATGCAACAAATCATATGCTGTCGAGAATCAACGGTTTGCTTCGAAGCATCCTCTGCAAACCACATTTGTATTCGTGCCATTTATTCTATCGATAAAGCAAAAAGTGTTCTTCTTCATGCTCCATTTAAGGGACGAGTCTCGACGTCGATTCATCAAAATCCAATGGACGAGAATGCCAGTTCCAACCAACCCAACAACAAGAACAAAATACCTATCTTTGTTTTCTTCAAAGATGCCAGGCATGTTTTTAAGCTGGATGCTCTTTCTCGGGAGATATTAGGGATTGCATTCCCTTCTGCACTCGCCGTTGCTGCTGATCCCATTGCTTCTCTCATAGACACTGCTTTCATAGGCCACTTAGTTAGGAGAGGGCCAGTGGAACTTGCTGCTGCAGGAGTTTCCATTGCTTTGTTCAACCAAGCTTCAAGAATCACCATATTCCCTCTGGTCAGCATCACCACTTCATTTGTGGCTGAGGAAGATACTCTTGAAAGGCTGAATACCAAAGCAGGCCAAAATGGTGACAAATATAAGCTCAGTGAAGTGATTATGCCAGAGGATCATATGCTTCATGACATAGAAAAAGGCACCCCCGAAGAGAATATTAAGACTACGGAAAAATCTACGGTTGAAAAACATGAATCAAAGGATCTCGTAGTCAAAAGTTCTGGACTCCAAGATGTGGAAAATGGTAATGCTACAACCAACAATGACCCAAAAATTGGACATGAAGGGAATAAAAATATATGCAAGTCTTCATGCATTACTAAGCATGGTGAGAAAGTTGGAAAGAAGAAGAGACGGATAGCTTCAGCATCAACAGCTCTACTTTTTGGCACCATCCTTGGCCTCATTCAAGCTCTTGTTCTTATATTTGGTGCCAAATCACTCTTAGGTGTTATGGGTGTGAAACCAGATTCTCCAATGCTAAATCCAGCAGAAAAGTACTTAAAGTTGAGATCGTTTGGGGCACCTGCAGTGCTTCTCTCCTTGGCCATGCAAGGAATCTTCAGAGGGTTTAAGGATACAAAAACTCCATTATATGTCATTGTTTCGGGATATGCACTTAATGTCATATTGGATCCAATTCTTATTTTCAAATTGAAATTAGGCATCAGAGGTGCAGCCATATCACACGTTCTTTCCCAGTACATGATGGCCTTCACTCTCTTATTCATATTAATGAGAAAAGTGCATCTCTTACCTCCAAGCGTAAAGGATTTGCAGATTTTTAGATTTCTTAAAAATGGAGGTTTGTTGATGCTAAGGGTGATTGCAGTGACATTTTGTGTGACCTTGGCAGCATCATTGGCAGCAAGGCTAGGTTCAATTCCCATGGCTGCATTTCAAACATGCCTACAAGTCTGGTTGACATCATCCCTTCTTGCAGACGGTTTAGCTGTTGCTGTTCAGGCAATTCTAGCTTGTTCTTTTACTGAAAAAGACCATAAGAAAACAACAGCAGCTGCAACAAGAACACTGCAAATGAGTTTTGTTTTAGGCACAGGGCTCTCTCTTGCTGTTGGACTTGGATTATACTTTGGAGCTGGAATATTTTCCAGAAATGTTCAAGTCGTGCACTTAATTAAAATAGGCATCCCGTTCGTGGCTGCTACTCAACCAATCAATTCATTAGCCTTTGTATTTGATGGTGTGAACTATGGAGCTTCTGATTTTGCATATGCAGCATACTCTCTGGCAAGTTCACACGTGCCCTTTATGCTGGTGTCAGTAGTAAGTGTAGGAATAGAGTTTCTTCTCTACAGGACCAAACATTTCATTGGCATTTGGATTGCACTAACCATATATATGACTCTTCGCATGTTGGCTGGTGTGTGGAGGATGGGAACTGCGACAGGACCTTGGCGCTATCTCAGAGATTGCTCATTGGCTTAG 1920 0.4172 DLTTEEGFMQQIICCRESTVCFEASSANHICIRAIYSIDKAKSVLLHAPFKGRVSTSIHQNPMDENASSNQPNNKNKIPIFVFFKDARHVFKLDALSREILGIAFPSALAVAADPIASLIDTAFIGHLVRRGPVELAAAGVSIALFNQASRITIFPLVSITTSFVAEEDTLERLNTKAGQNGDKYKLSEVIMPEDHMLHDIEKGTPEENIKTTEKSTVEKHESKDLVVKSSGLQDVENGNATTNNDPKIGHEGNKNICKSSCITKHGEKVGKKKRRIASASTALLFGTILGLIQALVLIFGAKSLLGVMGVKPDSPMLNPAEKYLKLRSFGAPAVLLSLAMQGIFRGFKDTKTPLYVIVSGYALNVILDPILIFKLKLGIRGAAISHVLSQYMMAFTLLFILMRKVHLLPPSVKDLQIFRFLKNGGLLMLRVIAVTFCVTLAASLAARLGSIPMAAFQTCLQVWLTSSLLADGLAVAVQAILACSFTEKDHKKTTAAATRTLQMSFVLGTGLSLAVGLGLYFGAGIFSRNVQVVHLIKIGIPFVAATQPINSLAFVFDGVNYGASDFAYAAYSLASSHVPFMLVSVVSVGIEFLLYRTKHFIGIWIALTIYMTLRMLAGVWRMGTATGPWRYLRDCSLA 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00200 639 CDD MATE_DinF_like 98 625 IPR044644 -
Spst11g00200 639 Pfam MatE 271 371 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst11g00200 639 Pfam MatE 429 578 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst11g00200 639 NCBIfam MATE family efflux transporter 106 605 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst11g00200 639 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 60 634 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00200 Spst-Chr11 7365158 7373388 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00389 5 3191589 3195166 Spst11g00200 11 7365158 7373388 ECH
Spst11g00200 11 7365158 7373388 Spst11g00200 11 7365158 7373388 ECH