Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00197 ATGGAGTCAGAAGTTGAAGCTGGGGTAAAGCCAGTGACAGCATTGAGTGCCCAAGTGTGCCAGATCTGTGGTGATGGTGTTGGGAAGACTGTGGATGGTGAACCTTTCATTGCGTGCGATGTTTGTGCTTTCCCTGTATGCAGGCCTTGCTATGAGTATGAAAGGAAGGATGGGAATCAATCTTGCCCCCAGTGCAAAACCCGGTACAAGAGGCACAAAGGAAGTCCTGCAATTATTGGAGATAGTGAAGAGGATGGTGCTGCCACTGATGGTGCCAGCGACTTTAATTATGATTCAGACAATCAAAACCAAAAGCAGAAGATATCAGAGCGCATGTTAAGCTGGCAATTGACATATGCACGAGGAGAGGAGGTTGGTGCTCCAAGTTATGATAAGGAAGTTTCTCACAACCACATTCCTCTGCTGACTAGTGGACAAGAGGTATCTGGAGAGTTGTCTGCAGCCTCACCTGAGAGGCTGTCAATGGCATCTCCTGCAGTTGGTGGTGGAAAACGTGTCCATAATATTCCATATTCATCTGATATTAATCAATCTCCAAATATCAGGGCTGGGGATCCAGGTTTGGGTAATGTTGCATGGAAAGAAAGAGTTGATGGCTGGAAGATGAAGCAAGAAAAGAATGTTGTTCCAATGAGCACTGGCCAAGCTGCTTCTGAGAGAGGGGCTGGAGATATTGATGCTACTACAGATGTGCTTGTGGATGATTCCTTGTTGAATGATGAAGCTCGACAGCCTCTTTCTAGGAAGGTTTCAATTCCGTCATCTAGGATCAATCCATATCGGATGGTCATTATGTTGCGGCTGGTTATCCTTTGTATTTTCTTGCATTATCGGATAACAAATCCAGTCCCCAATGCATATCCATTGTGGTTGGTATCAGTTATATGTGAGATTTGGTTTGCCATATCTTGGATATTGGATCAATTCCCCAAGTGGCTTCCTGTCAACCGTGAAACATATCTTGACAGGCTTGCATTGAGGTATGATCGTGAAGGAGAACCATCACAACTAGCTGCTGTTGACATTTTTGTCAGTACTGTTGACCCATTAAAGGAGCCCCCGCTTGTGACTGCCAATACCGTACTGTCTATTCTTGCAGTTGACTACCCAGTGGATAAGGTCTCCTGCTATGTGTCTGATGATGGTGCTGCTATGTTGACATTTGAAGCCCTTGCCGAGACATCAGAGTTTGCAAGGAAATGGGTTCCCTTTTCCAAGAAGTATAGCATTGAACCCCGTGCACCTGAATGGTACTTTGCACAAAAGATTGACTACTTGAAAGATAAGGTTCATCCATCATTCGTCAAGGATCGTAGAGTGATGAAGAGAGAATATGAGGAATTTAAAGTTCGTGTTAATGGACTTGTTGCAAAGGCACAGAAAGTTCCCGAAGAAGGATGGGTGATGCAAGATGGTACACCATGGCCTGGAAATAACACCAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGCCAAAGTGGAGGACTTGACACTGAGGGTAATGAACTTCCCCGTTTAGTCTATGTTTCTCGTGAAAAGCGCCCAGGTTTCCAACATCACAAGAAAGCTGGTGCCATGAATGCACTTGTAAGAGTATCTGCAGTCCTTACTAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCCTTGAGGGAAGCTATGTGCTTTATGATGGATCCCAACCTTGGTAAACATGTTTGCTATGTCCAGTTTCCACAGAGGTTTGATGGTATTGATAGAAATGATCGTTATGCCAATCGTAATACAGTGTTCTTTGATATAAACTTGAGAGGCTTGGATGGCATTCAGGGTCCTGTTTATGTGGGTACTGGATGTGTATTCAATAGGACAGCTTTATATGGTTATGAACCTCCTCTTAAACCAAAGCACAAAAAGCCTGGGTTGTTATCATCACTCTGCGGTGGAAATCGGAAGAAGAGTTCAAAATCTAGTAAGAAAGGATCAGACAAGAAAAAATCTAACAAGCATGTTGACCCTACTGTACCTATTTTCAGTCTAGAGGATATAGAAGAAGGAGTAGAAGGTACTGGATTTGATGACGAGAAATCACTACTTATGTCACAAATGAGCCTTGAGAAAAGGTTTGGTCAGTCTGCTGTTTTTGTAGCCTCCACTCTTATGGAGAACGGTGGTGTTCCTCAGTCTGCTACTCCAGAAACTCTTCTTAAGGAGGCTATTCATGTTATCAGCTGTGGTTATGAGGATAAAACAGAATGGGGATCTGAGATAGGATGGATTTATGGTTCTGTCACGGAAGATATTCTTACAGGATTTAAGATGCATGCCCGTGGTTGGCGATCTATATACTGTATGCCTAAGCGACCAGCGTTCAAAGGTTCTGCTCCCATCAATCTTTCAGACCGTCTGAACCAAGTGCTTCGATGGGCTTTAGGTTCTGTTGAGATTCTTTTTAGCCGACATTGTCCCATCTGGTATGGTTATGGTGGAAGGCTAAAGTGGCTTGAAAGGTTTGCGTATGTGAACACTACAATCTATCCGGTCACTGCCATTCCCCTTCTCATTTACTGTATCTTGCCTGCTGTCTGTCTGCTGACCAACAAGTTCATTATTCCACAGATCAGTAACCTTGCAAGCATCTGGTTCATTTCTCTCTTTCTTTCCATCTTTGCTACGGGAATCCTGGAGATGAGGTGGAGTGGAGTTGGAATCGACGAGTGGTGGAGGAATGAACAGTTTTGGGTTATCGGTGGTGTCTCGGCCCATCTCTTTGCCGTTTTCCAAGGCCTGCTCAAGGTGCTTGCTGGAATAGACACCAACTTCACGGTCACCTCCAAGGCCTCAGATGAAGATGGAGACTTTGCTGAGCTCTACATGTTCAAATGGACCACCCTTCTCATCCCCCCCACAACCCTTCTCATAATAAACATGGTAGGGGTTGTTGCTGGCATCTCCTATGCCATCAATAGTGGCTACCAATCATGGGGACCCCTGTTTGGTAAGCTTTTCTTTGCATTTTGGGTGATCATCCATCTCTATCCTTTCCTCAAAGGTCTCATGGGGCGCCAGAACAGAACACCAACCATTGTGGTGGTGTGGTCCATTCTGCTTGCATCCATTTTCTCTCTGTTGTGGGTGAGAATTGATCCTTTCACCACAAGGGTCACTGGCCCTGATGTTGAGGAGTGTGGCATTAACTGCTAG 3228 0.447 MESEVEAGVKPVTALSAQVCQICGDGVGKTVDGEPFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAIIGDSEEDGAATDGASDFNYDSDNQNQKQKISERMLSWQLTYARGEEVGAPSYDKEVSHNHIPLLTSGQEVSGELSAASPERLSMASPAVGGGKRVHNIPYSSDINQSPNIRAGDPGLGNVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDATTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIMLRLVILCIFLHYRITNPVPNAYPLWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKDRRVMKREYEEFKVRVNGLVAKAQKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLLSSLCGGNRKKSSKSSKKGSDKKKSNKHVDPTVPIFSLEDIEEGVEGTGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPVTAIPLLIYCILPAVCLLTNKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINMVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEECGINC 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00197 1075 FunFam Cellulose synthase 464 638 - -
Spst11g00197 1075 CDD mRING-HC-C4C4_CesA 18 68 - -
Spst11g00197 1075 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 250 1042 - -
Spst11g00197 1075 Pfam Zinc-binding RING-finger 10 86 IPR027934 -
Spst11g00197 1075 SUPERFAMILY Nucleotide-diphospho-sugar transferases 361 876 IPR029044 -
Spst11g00197 1075 MobiDBLite consensus disorder prediction 75 105 - -
Spst11g00197 1075 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 94 IPR013083 -
Spst11g00197 1075 FunFam Cellulose synthase 3 94 - -
Spst11g00197 1075 SUPERFAMILY RING/U-box 6 88 - -
Spst11g00197 1075 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 467 638 IPR029044 -
Spst11g00197 1075 MobiDBLite consensus disorder prediction 645 680 - -
Spst11g00197 1075 Pfam Cellulose synthase 347 1068 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00197 Spst-Chr11 7340682 7346263 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00197 11 7340682 7346263 Spst5g02064 5 56083239 56090738 PCT