Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00192 ATGAAACTGCCACAAAGCTTTGAGCTTTACGCAAAAGGCAGTAGTCACATTGCTATCGGTATTCCAAACACATTGGAAGAAGATTTTCACTCCGAGGAACAAATTTCCATCGTTAACAGGCATCCAGTCAAATATTTGAAACTGGAAAACATCATTGACAAGACTCCAGTCAAGAATGTTCATGCTGATTATGAAGACGTTTATTGTATTGACATTAACAAACAACCAGCATTTTACCATCCTTTACTAAAAGATCACAAGTTGCAGAGGAAACCTAGTTTTCAAAAATCAACTGGAAAAAGAAGTGGAAACAAAGCAGCTAGAACTATATTTGGACTCAAGAAAAAATGTCCAAGAGGAACAGTTCCTATTCAAAGAGCAGCAAAGAGTGATCTGATATCAGAAAAAAATTTGTTAAATTTTCATACCATGACTCAAGAAAACCCTGGTACTCATCTTGCAGAAGTATCACTTTTACACTCTCATGGTCCTTATTATGGTGTGGGTGGATTAAGCAGTGTGTATAATCCAAAAGTTGAGAAGAATCAAATCAGTGCTGCTCATATATGGATTCAGAATGGACCATCAGACACCAGCAACAGAATCACAGCGGGATGGCATGTGGCTCCAGCACTATATGGTGATTTTGCAACACATTTTTTTTCAGCATGGACGTCAGATAATTTTCACAAGACAGGGTGCTACAACATGCGGTGTAGAGGGTTTGTTCAGGTGAACAGAAAGGTTTACATTGGTGCTCCGGCCAATAAAACATCTACATATGGTGGTCCAACTGTGGAGGCTCAATTTTCTATTGTGCGGGACATAGAATCGAATAACTGGTGGTTAAGTGTAGATGATATGACAATTGGGTATTTTCCAGCTGCATTATTCTCAAACCTGGGTTCAGGGGATGAAGTAGGGTGGGGTGGGAGATCAAGAAGCTCTCCTGGTACTCCTACTCCTCCAATGGGATCTGGCCATTTTCCTGAAGATAAATTTACTCCTTCTCATGCTTCTTATTTTAGGCTTCTCACCTTCCAAGATGAAGCAAGAAGAAATCAAGGGCCTCATCAAGCTATGTCACAGGCAGTCACTGACAATGCTAATTGTTTTGGTGTTAAGTATTATGGAGATCAAGATGTTCTTGGATATTCTATTCTATTTGGAGGACCAGCCGTATTTGCTTTGCGCACCCTTTCCGCGATGCACATCAAGGAGATTTGCTTGGAAGGGTTCAAGTCCTACGCGACGCGCACCGTGGTTCCGGGCTTCGACCCCTTCTTCAACGCTATCACCGGCTTGAATGGTTCAGGCAAATCGAACATTCTCGATTCCATCTGCTTCGTTCTCGGCATCACCAATTTACAGCAGGTTAGGGCTTCCAACCTCCAGGAACTCGTCTACAAGCAGGGCCAGGCCGGAATCACCAAGGCCACAGTCTCCATCGTCTTCGACAATTCCGATCGGTCGCGGAGCCCTCTTGGGTATGAAGGCCATTCCGAGATCACAGTCACAAGACAGATTGTGGTTGGGGGCAGAAACAAATATTTGATCAATGGGAAGCTTGCACAGCCTAGTCAAGTTCAGAATCTTTTTCATTCAGTGCAGCTAAATGTTAATAATCCACATTTCCTTATAATGCAAGGGCGCATCACTAAGGTTTTGAATATGAAACCACCAGAGATATTGTCTATGCTTGAGGAAGCTGCAGGGACGAGAATGTACGAGACAAAGAAAGAGGCTGCTCTAAAAACACTTGAGAAGAAGCAGAGCAAGGTTGATGAGATTAACAAGCTTCTTGACCAGGAGATACTGCCTGCTCTTGAGAAGTTAAGGAAAGAAAAGACACAGTACATGCAATGGGCTAATGGCAATGCTGAATTAGATAGGCTGAGAAGGTTCGTTATTGCTTTTGAGTATGTTCGAGCGGAGAGGATTAAAGACAGTGCTGCTTCTGAGGTGGAAGAAGTGAAAGCCAAGATAGCTGAGATTGATGATGTTGCTAAGACAAATCAGGCGGAAATAAAGGAAATGGAGGCCAAAATAGCTCAGTTGACTGCTAAAAAGGAAGCAGACATGGGTGGAGAATTGAAATCTCTCTCAGAGAAGGTAGATGCACTTTCCCAGAATCTTGTGCGGGAAACGTCTGTATTAAATAACAAAGAAGACAATTTGAGGGGTGAAGAAGCCAACAAGGCAAATATTGTTAAAAACATTGAAGAATTGAAGCAATCTGTAAAAGAGAAGGCATCTGCTGTTCAAAAGGCTGAAGAGGGGGCAGCAGATCTGAAAAACACAGTTGACGAGCTTACAAAGAGTCTAGAGGAACATGAAAAAGAATACCAGGGTGTTTTAGCTGGCAAGAGCAGTGGTAATGAAGAGAAGTGCTTAGAGGATCAACTAAGGGATGCAAAGGAAGCAGTTGGGAGTGCTGAAACAGAATTGAAACAGCTGAAAGCCAAAATTAGCCATTGTGAAAAGGAACTGAAGGAGAAAACAAATCAATTAAGGTCAAAACGTGAAGAAGCTAATGCGGTCGAAAAAGAGCTCAACTCTAGACAAAAAGATGTGGAAAATATTAGAAAAGAGTTGGAGTCTCTTTCTTATAAAGAGGGTGAGATGGAGGATTTACAAAAGGAACGTATGACTGAGATGAACTGTGTGCAAAAGTGGAGGGATGAAATACGCAATCTTTCAGCATATCTGGCAAATGTTGAATTTACATACCGTGACCCTGTCAAGAACTTTGATAGGTCGAAGGTGAAAGGAGTTGTTGCAAAACTAATCAAAGTAAAGGATAGGTCCACAATGACTGCCCTAGAGGTTACAGCTGGTGGAAAGTTATATAATGTTGTTGTTGACACCGAAAATACTGGAAAACAACTACTACAAAATGGCAATCTTAGAAGAAGAGTGACGATTATACCTTTGAACAAAATACAATCCCATTCTGTTCCCTCCAGAATTCAGCAAGCTGCTGTTAGATTGGTGGGCAAGGGGAATGCTGAAGTAGCTCTTTCTTTGGTTGGTTATGAAGAAGAATTGAAGAGTGCTATGGAATATGTATTCGGTTCAACATTTGTCTGCAAAACTATTGATGCAGCAAAGGAGTATTCGGCTATTGTTGCATTTAATAGGGAGATTCACACTACAAGTGTCACTCTTGAAGGAGATATATTTCAGCCAAGGGGTCTTCTGACTGGTGGCAGCAGGAAGGGAAGTGGTGATCTATTGGGGCAACTTCATGCTTTGGCTGAGGCTGAGGCCAAACTTTTAATGCATCAAAGAAGGTTGTCAGAGATTGAGGGAAAGATCTCAAAGCTCCTTCCACTTCAGAAAAAATTTCTAGATCTCAAAGCACAATTAGAACTGAAGTCATACGACCTTTCCTTGTTTCAGAGCAGAGCTGAGCAAAATGAGCATCATAAGCTTGGAGAATCAGTGAAGAAGATTGAGCAAGAGTTAAATGAAGCAAAATCAACTGTCAAGGAAAAACAACTTTTGTATGAGGACTGTGTCAAAACTGTTTCATCTCTCGAGAAATCAATAAAAGACCATGATAAAAACAGAGGCAGTAGACTTAAAGGATTGGAGAAAAAGATAAAATCCATAAAATCTCAAATGCAGTCATCATTAAAAGATTTGAAGGGGCATGATAGTGAAAGGGAGAGGCTTGTAATGGAGATGGAAGCTGTTATCCAGGAGCAAGCATCTTTGGAGAATCAGTTAGCATCATTGGCAATGCTGAGTAGCAATCTTGCCTCAGAAGTAGAAGAACAAAGAACCACAGTTGTTGCTGCACGGAATAATCTTGATCAATTTCAGTCTGAGTTGAAATCAGTTCGTCTGAAAATGAAAGAATGTGATGAGGAAATCAGTGCTATTATTAAAGAGCAACAAAAGCTTGAACATAAAATTAGTGAGAGTAATCTAGAAAGGAAGAGGATGGAAAATGAGGTAAAACGAATGGAGATGGAACAAAAAGACTGCTCCGTTAGAGTAGATAAACTAATTGAGAAGCATGCATGGATTGCTTCTGAAAAACAATTGTTTGGTAGAAGTGGGACTGATTATGATTTTTCTTCTTGTGATCCAAGTAAATCAAGGGAAGAACTTGAGAAGCTTCAGACTGAGCAATCGGGGCTTGAGAAAAGGGTGAACAAGAAAGTGATGGCAATGTTTGAGAAGGCAGAGGACGAGTACAATGATTTGATGTCCAAAAAAAACATAATTGAGAATGACAAATCCAAAATAAAGAAGGTGATTGAAGAGCTAGATGAGAAGAAGAAGGAGACACTAAATGTTACTTGGATCAAAGTGAATAATGACTTTGGATCCATCTTTTCTACATTATTACCGGGAACAATGGCTAAGCTAGAACCTCCAGAAGGATGTAGCTTCCTTGATGGCCTTGAGGTTCGTGTTGCATTTGGAAGTGTGTGGAAGCAGTCATTGTCTGAATTAAGTGGAGGTCAGCGATCACTGCTCGCACTTTCTCTGATTCTGGCACTGCTTCTGTTCAAACCTGCTCCACTTTACATCCTTGACGAGGTTGATGCAGCTCTTGATTTGAGCCACACACAAAACATAGGAAGAATGATAAAGGCTCACTTTCCACACTCTCAGTTTATTGTGGTTTCCTTGAAGGAAGGCATGTTCAATAACGCAAATGTTCTTTTCCGGACAAAATTTGTGGATGGTGTTTCAACTGTTCAGCGAACTGTTGCATCTAAACAAAGCAAATGA 4749 0.4091 MKLPQSFELYAKGSSHIAIGIPNTLEEDFHSEEQISIVNRHPVKYLKLENIIDKTPVKNVHADYEDVYCIDINKQPAFYHPLLKDHKLQRKPSFQKSTGKRSGNKAARTIFGLKKKCPRGTVPIQRAAKSDLISEKNLLNFHTMTQENPGTHLAEVSLLHSHGPYYGVGGLSSVYNPKVEKNQISAAHIWIQNGPSDTSNRITAGWHVAPALYGDFATHFFSAWTSDNFHKTGCYNMRCRGFVQVNRKVYIGAPANKTSTYGGPTVEAQFSIVRDIESNNWWLSVDDMTIGYFPAALFSNLGSGDEVGWGGRSRSSPGTPTPPMGSGHFPEDKFTPSHASYFRLLTFQDEARRNQGPHQAMSQAVTDNANCFGVKYYGDQDVLGYSILFGGPAVFALRTLSAMHIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSIVFDNSDRSRSPLGYEGHSEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQSKVDEINKLLDQEILPALEKLRKEKTQYMQWANGNAELDRLRRFVIAFEYVRAERIKDSAASEVEEVKAKIAEIDDVAKTNQAEIKEMEAKIAQLTAKKEADMGGELKSLSEKVDALSQNLVRETSVLNNKEDNLRGEEANKANIVKNIEELKQSVKEKASAVQKAEEGAADLKNTVDELTKSLEEHEKEYQGVLAGKSSGNEEKCLEDQLRDAKEAVGSAETELKQLKAKISHCEKELKEKTNQLRSKREEANAVEKELNSRQKDVENIRKELESLSYKEGEMEDLQKERMTEMNCVQKWRDEIRNLSAYLANVEFTYRDPVKNFDRSKVKGVVAKLIKVKDRSTMTALEVTAGGKLYNVVVDTENTGKQLLQNGNLRRRVTIIPLNKIQSHSVPSRIQQAAVRLVGKGNAEVALSLVGYEEELKSAMEYVFGSTFVCKTIDAAKEYSAIVAFNREIHTTSVTLEGDIFQPRGLLTGGSRKGSGDLLGQLHALAEAEAKLLMHQRRLSEIEGKISKLLPLQKKFLDLKAQLELKSYDLSLFQSRAEQNEHHKLGESVKKIEQELNEAKSTVKEKQLLYEDCVKTVSSLEKSIKDHDKNRGSRLKGLEKKIKSIKSQMQSSLKDLKGHDSERERLVMEMEAVIQEQASLENQLASLAMLSSNLASEVEEQRTTVVAARNNLDQFQSELKSVRLKMKECDEEISAIIKEQQKLEHKISESNLERKRMENEVKRMEMEQKDCSVRVDKLIEKHAWIASEKQLFGRSGTDYDFSSCDPSKSREELEKLQTEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVASKQSK 1582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00192 1582 SMART SMC_hinge_2 920 1040 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Spst11g00192 1582 Coils Coil 1195 1215 - -
Spst11g00192 1582 MobiDBLite consensus disorder prediction 308 330 - -
Spst11g00192 1582 Coils Coil 580 600 - -
Spst11g00192 1582 Pfam Neprosin 181 392 IPR004314 -
Spst11g00192 1582 Gene3D - 829 992 - -
Spst11g00192 1582 Gene3D - 993 1072 - -
Spst11g00192 1582 Gene3D - 1400 1581 IPR027417 -
Spst11g00192 1582 Coils Coil 719 781 - -
Spst11g00192 1582 Gene3D - 403 604 IPR027417 -
Spst11g00192 1582 Gene3D - 175 292 - -
Spst11g00192 1582 Coils Coil 795 868 - -
Spst11g00192 1582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 403 1564 IPR027417 -
Spst11g00192 1582 Coils Coil 1223 1243 - -
Spst11g00192 1582 Coils Coil 1142 1169 - -
Spst11g00192 1582 Coils Coil 641 689 - -
Spst11g00192 1582 Pfam SMC proteins Flexible Hinge Domain 920 1039 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Spst11g00192 1582 Pfam Neprosin activation peptide 67 146 IPR025521 -
Spst11g00192 1582 Coils Coil 1388 1432 - -
Spst11g00192 1582 FunFam Structural maintenance of chromosomes 2 920 992 - -
Spst11g00192 1582 Pfam RecF/RecN/SMC N terminal domain 404 1567 IPR003395 -
Spst11g00192 1582 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 403 1580 - -
Spst11g00192 1582 SUPERFAMILY Smc hinge domain 886 1092 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Spst11g00192 1582 Coils Coil 1085 1105 - -
Spst11g00192 1582 FunFam Structural maintenance of chromosomes 2 1401 1580 - -
Spst11g00192 1582 CDD ABC_SMC2_euk 403 558 IPR027120 GO:0005524|GO:0016887
Spst11g00192 1582 Coils Coil 1258 1334 - -
Spst11g00192 1582 FunFam Structural maintenance of chromosomes 2 403 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00192 Spst-Chr11 7289829 7306358 Transposed