Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00191 ATGAGTTATGTTCAAGAAAACGATACACTGAGTACTCTTTATGAGGTTTCATTGAGAGGCAGTGTATCAGAGTTAGAAACTCTAATTGCAAGAAACCCTCTTATCCTTCACAAGCTTTCCTTAACAACCTTCACAGAAACTCCGTTACACATATCAGCTTTACTTGGCCACCTTGATTTCACAAAGTCCCTTCTCACTCACAAACCTCAACTTGTTCTTGAGTTGGACCACTCCAAACGCACCGCTCTTCATCTAGCTTCTGCAGAAGGCCATGTAGAGATTGTTCATTTGCTGTTGCAAACATGTGCAGATGCATGTTTGATGAGTGACCAAGATGGAAGAATCCCTCTTCACTATGCAGCTATGAGAGGAAGAACAGAGGTTGCAAGAAAGTTGGTTAGTGGAGCAAAGTCAGAATCAGTGATGGTGCTTGATGGGTCAGGAAAAACTATGTTTCACCTTTGTGTCGAGCACAATCACTTGGAGACCTTGAAAACATTGGTGCAAGTAGGAGACGTCAGGGAGGACTTTCTAAACATTGGAGACTTTCATCGTGGAAATACCATTCTCCATCTGGCTGTTATGTTGAAGCAAATTGAGACGGTAAGGTATTTACTCTCAATCTCCAAAATAAAAGAAGAAGCAAATGCTGAGAACAAGATGGGTTATACTGCTATGGACATGCTAGAGCTGGGTCCAAAAGATATGAGAAGTCTTCAAATAAAACTCATGTTGATGGATGCCGGATTCAAGAACAATGAACAGAACCAAGTAGATTACCCTCCATCCACATCAGTCATAGATGTTGTTCCATCAAGGATAGTGAATCCAAATGAAAAGTTTTGGAGCAAGTCTTTGAAGCGTGTGAACAAGTTCTTACAGCAGAAGAGTGGTAGGTTGGAAGAAATGAGAGGGATGTTAAGTGTCGTGGCTACAATGATCGCAACAGCGACCTTTGGTGTTGTGATGAACCCACCAGGTGGTAATGTAGATTTTAATAGTTCGGCTTATTTTCGTTTCTACCCATTCAATTTTCGAGAATTGGCTACAAATTTCTTAACGATGAACACCATCTCTTTCATTGCATCACTTGGTGTGACTCTCTTACTTATAAGTGGAGTTCCCTTACAGAATGAAGTCGCAATGGGGTTCTTATCAATAGGCACAGGTGTTTGTCTCACATTTCTTGTTCTTACTTACCTACATGCTGTGCCTTTGAACCCCCACATGCAGTTTGGGCAAATGTCTTCTGTGTTGTTTTCTTGGCTTGGACTTTTTGGGGCAATATTTGTGTTGATCATAATTCGTGTAATTTCTTGGGTGGTGAATGTTTTGTAA 1338 0.4096 MSYVQENDTLSTLYEVSLRGSVSELETLIARNPLILHKLSLTTFTETPLHISALLGHLDFTKSLLTHKPQLVLELDHSKRTALHLASAEGHVEIVHLLLQTCADACLMSDQDGRIPLHYAAMRGRTEVARKLVSGAKSESVMVLDGSGKTMFHLCVEHNHLETLKTLVQVGDVREDFLNIGDFHRGNTILHLAVMLKQIETVRYLLSISKIKEEANAENKMGYTAMDMLELGPKDMRSLQIKLMLMDAGFKNNEQNQVDYPPSTSVIDVVPSRIVNPNEKFWSKSLKRVNKFLQQKSGRLEEMRGMLSVVATMIATATFGVVMNPPGGNVDFNSSAYFRFYPFNFRELATNFLTMNTISFIASLGVTLLLISGVPLQNEVAMGFLSIGTGVCLTFLVLTYLHAVPLNPHMQFGQMSSVLFSWLGLFGAIFVLIIIRVISWVVNVL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00191 445 ProSiteProfiles Ankyrin repeat profile. 78 110 IPR002110 GO:0005515
Spst11g00191 445 ProSiteProfiles Ankyrin repeat region circular profile. 185 207 - -
Spst11g00191 445 Pfam Domain of unknown function 299 401 IPR026961 -
Spst11g00191 445 ProSiteProfiles Ankyrin repeat profile. 112 134 IPR002110 GO:0005515
Spst11g00191 445 SMART ANK_2a 147 176 IPR002110 GO:0005515
Spst11g00191 445 SMART ANK_2a 112 143 IPR002110 GO:0005515
Spst11g00191 445 SMART ANK_2a 78 107 IPR002110 GO:0005515
Spst11g00191 445 SMART ANK_2a 44 73 IPR002110 GO:0005515
Spst11g00191 445 SMART ANK_2a 185 214 IPR002110 GO:0005515
Spst11g00191 445 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 11 441 - -
Spst11g00191 445 SUPERFAMILY Ankyrin repeat 9 228 IPR036770 -
Spst11g00191 445 ProSiteProfiles Ankyrin repeat region circular profile. 112 134 - -
Spst11g00191 445 ProSiteProfiles Ankyrin repeat region circular profile. 78 104 - -
Spst11g00191 445 Gene3D - 8 238 IPR036770 -
Spst11g00191 445 ProSiteProfiles Ankyrin repeat profile. 185 207 IPR002110 GO:0005515
Spst11g00191 445 Pfam Ankyrin repeats (3 copies) 110 171 IPR002110 GO:0005515
Spst11g00191 445 Pfam Ankyrin repeats (3 copies) 40 101 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00191 Spst-Chr11 7286653 7288310 Dispersed