Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00188 ATGGCGGAGCACGGCAGCGCTGCCGTCAATGACGGCGAAACAGGACCGCAACAAAGCGAACGCCACCACGTTAACAACGACAACAACGCGAAGAGTATAGATCCTGAGTTGTTCTGCTGTTTGCTTCAGCCAGCCACCGCCGACACCGATCCCCAGTACATCGGCATGCGCCGCCTCCTCCTTCATCGGAAGGCGGAGGCCGGAGATCTCCGCCGCCTAGATTGGAGATGCAATGGGAAAACTTACGTGGCATACCGGAATTACATAAGTAGGCCTAGAAACTGGGAAAGGGATAGTTCACGTGCCCATAGTCTCCAGAGTACTCCAGGAAACAGTAACCTAGGCACTAGGCTTTTGGCTGGGTGCGGCAAGCATGCTGTTGTCAAGGAAGTGATGATTGTGCTTCGCTCATATGCTGATCTGCAAAATGCAAATCCAGTATATAATCATAGATCAAGTTTTGGCTCAACTGCAAGTGATTCTGATCGTCCTAAACACCGTGGGGCTGAGTCTGCTTATTCTTTTGTTGGAATGCATTGTATCTTTGATAAGTGCAAAACCGCTGTTACGGTATTGAAGTTTGGGCACATGAGTTCTGAACTACTTGCTTATGGGGCAGCGGATGGAACCTTGACTGTGTGCAGTGTATCAGAGAATCCTTCAGTCATCAAACAATTAGAAGGGCATTCCAAAGACGTGACAGATTTTGATTTTTCATCAAACAATCAATACATTGCATCGTCTTCATTGGATAAAACTGTGAGAGTATGGGAGATAGCGAAAGAGGTTCTAATAGCCATTCTTTACGCCAAAGGAGGTGATAAAATTGACTTTCCTAGATTGAAGATGGCTAGATTTTTTATGGATAGAGAAAATGATGAGCTTGACCGTGGAGTTACCTCTTTGGACCATGACCATACAGGACTTCTCATATTTTGTGGAGATGCCCAGGGGTGTATATACTCAGTAAATATGAACTCTCACACTGGTGTATTATCTCGATCGCATCATTTTCGAAATAGTAGCAGGCAGAAATCTCCTGTTACCACCGTGCAGTACAGGAGTTTCTCTCTACTCGCTGGCGGACCTGTGTTATTGACATGTACCCAGGATGGAAACCTGTCTTTCTTCAGTGTGGCTTTGGAGATAAATGGCTATTTATCTCTTCGATGCTCACTAAAATTAGCTCCACGTATTCGCAAAATTCAAGCTTCTTTCTGTCCTCTCCTATCCCTTGAAAAAGGAGAATTCATAGTTGCTGGAAGTGAGGACTCAAATGTCTATTTTTATGATTTAACTCGGCCAAAAAATACATGCGTGAACAAGCTACAGGGTCATCGGTTTCCTGTAATGGGTATTGCCTGGAACCATGGAGAAAATTTATTGGCTTCATCTGATTTTTTTGGCGTAGTAATTGTGTGGAAGAGAGAAAGAACAAATCAAAAGAAAAACATACAACAATAG 1464 0.4419 MAEHGSAAVNDGETGPQQSERHHVNNDNNAKSIDPELFCCLLQPATADTDPQYIGMRRLLLHRKAEAGDLRRLDWRCNGKTYVAYRNYISRPRNWERDSSRAHSLQSTPGNSNLGTRLLAGCGKHAVVKEVMIVLRSYADLQNANPVYNHRSSFGSTASDSDRPKHRGAESAYSFVGMHCIFDKCKTAVTVLKFGHMSSELLAYGAADGTLTVCSVSENPSVIKQLEGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIAKEVLIAILYAKGGDKIDFPRLKMARFFMDRENDELDRGVTSLDHDHTGLLIFCGDAQGCIYSVNMNSHTGVLSRSHHFRNSSRQKSPVTTVQYRSFSLLAGGPVLLTCTQDGNLSFFSVALEINGYLSLRCSLKLAPRIRKIQASFCPLLSLEKGEFIVAGSEDSNVYFYDLTRPKNTCVNKLQGHRFPVMGIAWNHGENLLASSDFFGVVIVWKRERTNQKKNIQQ 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00188 487 SUPERFAMILY WD40 repeat-like 183 476 IPR036322 GO:0005515
Spst11g00188 487 PANTHER WD REPEAT PROTEIN 26-RELATED 164 480 - -
Spst11g00188 487 ProSitePatterns Trp-Asp (WD) repeats signature. 245 259 IPR019775 -
Spst11g00188 487 SMART WD40_4 219 258 IPR001680 GO:0005515
Spst11g00188 487 SMART WD40_4 395 431 IPR001680 GO:0005515
Spst11g00188 487 SMART WD40_4 344 378 IPR001680 GO:0005515
Spst11g00188 487 SMART WD40_4 174 215 IPR001680 GO:0005515
Spst11g00188 487 SMART WD40_4 436 475 IPR001680 GO:0005515
Spst11g00188 487 Gene3D - 179 278 IPR015943 GO:0005515
Spst11g00188 487 Pfam WD domain, G-beta repeat 223 257 IPR001680 GO:0005515
Spst11g00188 487 MobiDBLite consensus disorder prediction 1 28 - -
Spst11g00188 487 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 226 259 - -
Spst11g00188 487 ProSiteProfiles Trp-Asp (WD) repeats profile. 226 259 IPR001680 GO:0005515
Spst11g00188 487 Gene3D - 284 487 IPR015943 GO:0005515