Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00186 ATGGCCTCTCCACCTTTTTCTTCCTGCTCTGTCAAGGATGCAAAAGTGCTTATGGTAGGTGCTGGTGGAATTGGCTGCGAGCTTCTCAAGACTCTCGCTCTCTCCGGCTTCCCTGACATTCACATCATTGACATGGACACCATAGAAGTCAGTAACCTGAACAGACAATTTCTATTTCGACAATCTCATGTTGGGCAATCCAAAGCTAAAGTTGCTAGGGATGCTGTGTTAAAATTTAGGCCCCACATAAACATTACACCATACCATGCAAATGTCAAAGATCCGGAATTCAATGTGGACTTCTTTAAGCAGTTTAACGTTGTTCTAAATGGACTTGACAATCTAGATGCGCGCCGGCATGTGAATCGCTTGTGCCTGGCAGCTAATGTTCCTTTGGTTGAAAGTGGAACTACTGGGTTCCTTGGGCAGGTAACCGTGCATGTCAAGGGAAGAACAGAGTGCTATGAGTGTCAGCCTAAACCAGCCCCCAAGACATATCCTGTTTGTACTATCACCAGTACTCCATCAAAGTTTGTTCACTGTGTTGTGTGGGCCAAGGACCTACTTTTTGCTAAGTTATTTGGGGATAAAAATCAGGAAAATGACTTGAATGTTCGATCAAGTGATGGTGCTAGCTCCTCAGAAAATGTAGAGGATGTATTTGAACGTAGGAAAGATGAAGACATTGATCAATATGGAAGGAAAATTTTCGATCATGTATTTGGGTATAACATCGAATTAGCTTTGTCTAATGAAGAAACATGGAAAAATCGTCATAGACCAAAGCCTATATACAGCAAGGATGTTCTGTCTGATGAACTGGCTCAACAAAATGGAAATTTGGAGAAAAATAATGTATGTGATGATGAATTATCAGTATCTGCCATGGCATCTTTGGGCATGAAGAACCCACAGGACATTTGGAGTATCAGAGAAAATTCTAGAATATTTCTTGAAGCATTGCGATTATTTTTTACAAAAAGGGAAAAGGAGATTGGCAATCTAGGATTTGACAAAGATGACCAGTTGGCTGTTGAATTTGTTACTTCAGCTGCAAACATACGGGCTGCTTCCTTTGGCATCCCTCTGCACAGCCTTTTTGAAGCTAAAGGTATTGCTGGTAATATTGTGCATGCAGTTGCGACTACAAATGCTGTTATTGCTGGGTTGATTGTCATTGAAGCAATCAAAGTGCTGCAAAATGACATTAAAAATTATAGAATGACGTATTGTCTGGAACATCCATCAAGAAACATGCTGCTTATGCCAGTGGAGCCATTTGAACCTAACAAGTCTTGTTATGTTTGTTCCGAGACACCTTTATCGCTTGAAATAAACACCAACCGCTCAAAGTTGAAAGACTTTGTCGAAAAAATTGTCAAGGCAAAACTAGGGATGAACCTTCCTCTTATTATGTGTGCTTCAAACCTCCTTTATGAAGCTGGTGATGTTGAGGATGACATGATTGCCATTTATGAGGCCAACCTTGAAAAGGTCCTGGCTGAGCTTCCTTCTCCGGTAACTGGTGGAACAATGCTTACAGTAGAGGATATGCAACAGGAATTTGTTTGCAATATTAATATCAAGCATAGAGAGGAGTTTGATGAAGAGAAAGAACCTGATGGAATGGTTCTCTCAGGATGGACTCAACCAGTTTCAGCAGCAGAAAATAAAGACAAATCTGTTGGCAATGGTGCAAGCCCCTCAGATGCGTTAGTAACAGCTGTGGAATCTGAAAAGAATGATGAGATAACCGTCGTTTCAACCTTGAAGAAGCGAAAGCTTCCAGAAGAAACTGACATTTCATGTGCGGATGCCGAAGCGAAGCATCAAAAACAGTTGGAAGTAATTGATGACGAAGATGATCTTGTCATGCTTGATGGGGATTTAGACAGCTTTAAAAAGAGAAAATTGTCATAG 1920 0.4094 MASPPFSSCSVKDAKVLMVGAGGIGCELLKTLALSGFPDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPHINITPYHANVKDPEFNVDFFKQFNVVLNGLDNLDARRHVNRLCLAANVPLVESGTTGFLGQVTVHVKGRTECYECQPKPAPKTYPVCTITSTPSKFVHCVVWAKDLLFAKLFGDKNQENDLNVRSSDGASSSENVEDVFERRKDEDIDQYGRKIFDHVFGYNIELALSNEETWKNRHRPKPIYSKDVLSDELAQQNGNLEKNNVCDDELSVSAMASLGMKNPQDIWSIRENSRIFLEALRLFFTKREKEIGNLGFDKDDQLAVEFVTSAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAVIAGLIVIEAIKVLQNDIKNYRMTYCLEHPSRNMLLMPVEPFEPNKSCYVCSETPLSLEINTNRSKLKDFVEKIVKAKLGMNLPLIMCASNLLYEAGDVEDDMIAIYEANLEKVLAELPSPVTGGTMLTVEDMQQEFVCNINIKHREEFDEEKEPDGMVLSGWTQPVSAAENKDKSVGNGASPSDALVTAVESEKNDEITVVSTLKKRKLPEETDISCADAEAKHQKQLEVIDDEDDLVMLDGDLDSFKKRKLS 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00186 639 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 12 487 IPR045886 -
Spst11g00186 639 Pfam Ubiquitin-activating enzyme, SCCH domain 319 370 IPR019572 -
Spst11g00186 639 PIRSF SUMO_E1B 8 621 IPR030661 GO:0016925|GO:0019948
Spst11g00186 639 FunFam SUMO-activating enzyme subunit 164 375 - -
Spst11g00186 639 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 164 375 IPR023318 -
Spst11g00186 639 FunFam SUMO-activating enzyme subunit 2 10 184 - -
Spst11g00186 639 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 443 534 IPR028077 -
Spst11g00186 639 FunFam SUMO-activating enzyme subunit 378 411 - -
Spst11g00186 639 FunFam SUMO-activating enzyme subunit 437 582 - -
Spst11g00186 639 Gene3D - 437 627 - -
Spst11g00186 639 Gene3D - 8 109 IPR042449 -
Spst11g00186 639 CDD Uba2_SUMO 15 436 - -
Spst11g00186 639 Pfam ThiF family 11 434 IPR000594 -
Spst11g00186 639 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 12 483 IPR035985 GO:0008641
Spst11g00186 639 FunFam SUMO-activating enzyme subunit 2 4 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00186 Spst-Chr11 7223205 7228985 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00186 11 7223205 7228985 Spst11g00186 11 7223205 7228985 ECH