Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00183 ATGGGTGCTGTTTGTTGTGTTGCTGCCAAAGATAAAACATTACAAAGTGCATCACCCAGTGAAATGTTGCATCGGAATATTCGGTATTCTCCCACGTGGAACTTTAGGTGGGATCATCGAGGGCGTGTAGCTGGTGAAGATACTTCTGTAACTTGGTTTTCTAATGGTATTAGTGGGAATGACGGATTGGAGAATAAACATGAACCCTCATATGTATCGGAGGATGGAAGCCCATTGCAGAATTATCAAAGAAATAGATGGCAAAAATCCCCAGTCTCAGAAGAAACTGCTAGGAACGTGATAAATTCATCTTCAGAACAAACGATTTCAAGGAATCTCTTAAAAAATGTGAGCATGGAACAGGGGAAGGGGTTGGCAGAATCATTAACAATGTCATGCCCGTATCCCACAAAACTTCTACATTCATTGCCTTCTACCTCTTCGTCAGTATTGCCTCAGCCATCCCAAAGTCACCCAGTTCCATCCAGCTCAACCCCATCAAGCTGGCCTTGCCTGTCGACAGGACTGCAACTATCACGGCAAGTTTCTGATAGCCAAATCTTGGGATTTAAGACACCTAGTAACACTTATGTATCTGAAGAGAGGCCAGTGTTTCCTTCGTGGAGCAATGAATATGCCATGCACTCCCATGGTGGGTCTTCAGGTAATTGTTCTAGGTCTGGCCTTTCTGAGCCGACAGGCAGTTCCCTCAAAGAAAGATGGTCATTTGATAGTGAGTCATTTGCTTTTAATTGTGAAAGGCTGGTTAGATCCAGTAGTCGGTTTTCGAATTCTCCAGTTGAGTTCCAGACATGTGGTGTTTGCTCAAAACTTTTGACTGAGAAGTCTTCTTGGGGCACCCAAAAGATAATCGAAAGTAATGACCTTTCTGTAGTTTCTGTCCTTATTTGTGGGCATGTTTATCATGCGGAATGCCTGGAGAGTTTGACAGCTGAAGTCAACAAGTATGATCCACCTTGCCCTGTTTGCACTTTTGGTGAGAAATATACTCTTAAGTTATCTGAAAAAGCTCTGAAAGCTGAAATGGATTTGAAGGCTAAAAATAAGAAATCAAGGAACCGAATTGTGGACAGTGATATTGATCATAATTCTGTTGTGCATGAACATTTTAGAGAAAAATGGCGTCAAACTAGTAAAGGTCCAGGAATTGATTCTAGTTCTTGTAGGAGAAGCTCTAATGGGAAACCTTTTCTGAGGAGACACTTTTCATTTGGCTCAAGGAGTTCCAAATCCATGCTAGATAATCAGTCGACCTGGAAGAAAGGCTTCTTTTGGGCAAAATCTAGCAGGGAATAA 1317 0.4207 MGAVCCVAAKDKTLQSASPSEMLHRNIRYSPTWNFRWDHRGRVAGEDTSVTWFSNGISGNDGLENKHEPSYVSEDGSPLQNYQRNRWQKSPVSEETARNVINSSSEQTISRNLLKNVSMEQGKGLAESLTMSCPYPTKLLHSLPSTSSSVLPQPSQSHPVPSSSTPSSWPCLSTGLQLSRQVSDSQILGFKTPSNTYVSEERPVFPSWSNEYAMHSHGGSSGNCSRSGLSEPTGSSLKERWSFDSESFAFNCERLVRSSSRFSNSPVEFQTCGVCSKLLTEKSSWGTQKIIESNDLSVVSVLICGHVYHAECLESLTAEVNKYDPPCPVCTFGEKYTLKLSEKALKAEMDLKAKNKKSRNRIVDSDIDHNSVVHEHFREKWRQTSKGPGIDSSSCRRSSNGKPFLRRHFSFGSRSSKSMLDNQSTWKKGFFWAKSSRE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00183 438 MobiDBLite consensus disorder prediction 74 98 - -
Spst11g00183 438 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 252 332 IPR013083 -
Spst11g00183 438 MobiDBLite consensus disorder prediction 61 98 - -
Spst11g00183 438 PANTHER EXPRESSED PROTEIN 1 335 - -
Spst11g00183 438 ProSiteProfiles Zinc finger RING-type profile. 272 331 IPR001841 -
Spst11g00183 438 CDD RING-H2 272 330 - -
Spst11g00183 438 SMART ring_2 272 330 IPR001841 -
Spst11g00183 438 SUPERFAMILY RING/U-box 271 331 - -
Spst11g00183 438 MobiDBLite consensus disorder prediction 144 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00183 Spst-Chr11 7209300 7211950 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00183 11 7209300 7211950 Spst11g00183 11 7209300 7211950 ECH