Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00179 ATGATGAGACAATATTCATCTCTGGTTCTTGTCTTGTTGTTTGTTTGCTACATCTCTTTCTCAGAAGCTCTTACTGGTTTCAGTGTTGAACTGATCCACCGTGACTCACCAAAATCACCCTATTATCGTCCCAACCAAACTCAGTTCGAACGAGTCATGGATGCCGTGAATCGTTCCATGATCCGTGCCAACTATTTCAGAAAATCTTCCGTGTCCCTGCAAGATATAGCCGAGACGAATGTAGTAACAATTAACGGTGAATATCTGATGGGCTACAAAGTTGGAACCCCACCATTCGAAATCTTTGGTGAAATTGATACGGGTAGTAGCCTCATTTGGATGCAGTGTCAACCATGTGAGAGCTGTTACAAAGAAACCAGACCTGTATTTGATCCTTCCACTTCCGCCACATATGACCACCTCTCTTGTTATTCTCTGGAATGTAAACTAGAGCCATTTACCTTCTGCAAACCAGAAATAGGGGATAAATGTCTATATAATACTGTGTATGAGGATGGGTCACGATCAAGTGGAGAGCTTATTATGGAGACCCTCATTATAGGCTACACTGATCCTCCTTTCAGATTTCCAGGCATTGTGTTCGGATGCGGAAACAAAAATAGTGGGTTCTTTCATGCACAAGCCTCTGGTGTAGTTGGCCTTGGAACTGGACCTAGCTCCCTCATAAATCAATTACCAGACAAAATAGATAAAAAGTTTTCGTATTGTTTTCCACCCATGTTCTCTCGATCCAGTTATTCTAGCAAAATCAATTTTGGAGATGTTGCTGTGGTTTCTGGGGGAGGGACTGTCTCAACCCCTATAATCCCAAAAGGCCAGGAAACTTTTTACTACCTACACTTGGAAGCAATCAGTGTGGGAAATAAGAGAATAGAGTATGTTTCTAGAGAGTTTGCAAACATCATAATTGACTCAGGGACAACAATAACCTTTTTGCCGAAGGAATTTTACTCACGGGTGGTATCAGCAGTGGCAGCTGCAATTCCAAATAAGCCTATGAAAATTCCACAGAAACCTTACACCCTATGCTATGCAAGTCAGTTTGGTAAACTAACAGTACCAGTAATCACAGCTCATTTTAAAGATGCAGATGTGAAGTTGTATGCTATCAGCACCTTTTCTACTATGGCTCCTGGGATATCATGTTTTTCTTTTCTTCCAGGTGAAACTCCCATCTTTGGAAACTTGGCACAACAAAACCTCATGGTTGGCTACGACGTCCACCAGAGAAAAGTCAACTTTAAGCCCACAGATTGTACCAAACAGTGA 1290 0.4178 MMRQYSSLVLVLLFVCYISFSEALTGFSVELIHRDSPKSPYYRPNQTQFERVMDAVNRSMIRANYFRKSSVSLQDIAETNVVTINGEYLMGYKVGTPPFEIFGEIDTGSSLIWMQCQPCESCYKETRPVFDPSTSATYDHLSCYSLECKLEPFTFCKPEIGDKCLYNTVYEDGSRSSGELIMETLIIGYTDPPFRFPGIVFGCGNKNSGFFHAQASGVVGLGTGPSSLINQLPDKIDKKFSYCFPPMFSRSSYSSKINFGDVAVVSGGGTVSTPIIPKGQETFYYLHLEAISVGNKRIEYVSREFANIIIDSGTTITFLPKEFYSRVVSAVAAAIPNKPMKIPQKPYTLCYASQFGKLTVPVITAHFKDADVKLYAISTFSTMAPGISCFSFLPGETPIFGNLAQQNLMVGYDVHQRKVNFKPTDCTKQ 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00179 429 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 308 319 IPR001969 GO:0004190|GO:0006508
Spst11g00179 429 FunFam Aspartyl protease AED1 68 260 - -
Spst11g00179 429 FunFam Aspartic proteinase CDR1 262 429 - -
Spst11g00179 429 PANTHER OS07G0603500 PROTEIN-RELATED 29 427 - -
Spst11g00179 429 ProSiteProfiles Peptidase family A1 domain profile. 88 422 IPR033121 -
Spst11g00179 429 Pfam Xylanase inhibitor C-terminal 284 422 IPR032799 -
Spst11g00179 429 CDD pepsin_A_like_plant 87 426 IPR034161 -
Spst11g00179 429 Gene3D Acid Proteases 67 261 IPR021109 -
Spst11g00179 429 SUPERFAMILY Acid proteases 82 426 IPR021109 -
Spst11g00179 429 Gene3D Acid Proteases 267 429 IPR021109 -
Spst11g00179 429 Pfam Xylanase inhibitor N-terminal 88 261 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00179 Spst-Chr11 7178173 7179462 Transposed