Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00173 ATGGCTTTCAATCAAGAACTAGAAGCTATAACCCAAGCTTTCTCAGGGCATGGAGTGGATGAGAAATCATTGGTAACAATTCTGGGAAAGTGGGATCCTACTGAGAGAGAAGGTTTCAGGAAGAAGACACCACATTTGTTCACAGAGGATCATCAACGCCACTTTCAGAGGTGGGATGATCACTCTGTTCATCTTCTCAAGCATGAGTTTGTGCGTTTTAAGAATGCTGTGGTGCTGTGGTCCATGCACCCTTGGGAAAGAGATGCCCGTTTAGTAAAAGAGGCCCTAAAGAAGGGCCAAAATGCATATGGAATTCTCATTGAGGTTGCATGCACCAGATCCTCAGAAGAGCTATTAGGAGCTAGGAAAGCCTATCACTCCCTCTTTGATCACTCCATTGAAGAAGATGTTGCCTCTCACATCCATGGCATTGAAAGAAAGCTATTGATTGCCTTATTAAGTGCCTATAGATATGAAGGATCAGTGGTCAAAGATGCCAGTGCAAAATCAGAGGCCAAAGTCCTCTACAATGCCATCAAGAATGCTCATAAGAAGCCTATTAATGAGGATGATGAAGTAATAGGGATATTGGCAACAAGAAGCAAGTTACATCTCCAAGCAGTTTATAAGCACTACAAAGAGATATCTAGCAAGAACCTTGATGAGGATCTTGATGATTTAAGATTTAAAGAGACTGTGCAATGTCTCTGTATCCCACAAATATATTTCAGCAAGGTTTTGAATGCAGCATTGAGAATTGATGTGGATAAGAATAATAAGAAATCTCTGACTCGTGTCATTGTTACTAGAGCTGACATTGATATAAAGGAAATAAAAGCAGAGTACCAAAACCTATATGGAGTTTCTTTACCCGAGAAAGTTGAGGAGATTGCTAGAGGAAGCTATAAGGATTTCTTGTTAAATTTGATTGTTAGAGGATGCTGA 945 0.4021 MAFNQELEAITQAFSGHGVDEKSLVTILGKWDPTEREGFRKKTPHLFTEDHQRHFQRWDDHSVHLLKHEFVRFKNAVVLWSMHPWERDARLVKEALKKGQNAYGILIEVACTRSSEELLGARKAYHSLFDHSIEEDVASHIHGIERKLLIALLSAYRYEGSVVKDASAKSEAKVLYNAIKNAHKKPINEDDEVIGILATRSKLHLQAVYKHYKEISSKNLDEDLDDLRFKETVQCLCIPQIYFSKVLNAALRIDVDKNNKKSLTRVIVTRADIDIKEIKAEYQNLYGVSLPEKVEEIARGSYKDFLLNLIVRGC 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00173 314 Gene3D Annexin 242 311 IPR037104 GO:0005509|GO:0005544
Spst11g00173 314 ProSiteProfiles Annexin repeat profile. 166 252 IPR018502 GO:0005509|GO:0005544
Spst11g00173 314 PANTHER ANNEXIN 5 309 - -
Spst11g00173 314 Gene3D Annexin 150 241 IPR037104 GO:0005509|GO:0005544
Spst11g00173 314 PRINTS Annexin family signature 253 273 IPR001464 GO:0005509|GO:0005544
Spst11g00173 314 PRINTS Annexin family signature 15 37 IPR001464 GO:0005509|GO:0005544
Spst11g00173 314 PRINTS Annexin family signature 178 204 IPR001464 GO:0005509|GO:0005544
Spst11g00173 314 PRINTS Annexin family signature 281 296 IPR001464 GO:0005509|GO:0005544
Spst11g00173 314 SUPERFAMILY Annexin 4 310 IPR037104 GO:0005509|GO:0005544
Spst11g00173 314 FunFam annexin D4 241 311 - -
Spst11g00173 314 SMART annex3 189 236 IPR018502 GO:0005509|GO:0005544
Spst11g00173 314 SMART annex3 99 152 IPR018502 GO:0005509|GO:0005544
Spst11g00173 314 SMART annex3 259 309 IPR018502 GO:0005509|GO:0005544
Spst11g00173 314 ProSiteProfiles Annexin repeat profile. 83 154 IPR018502 GO:0005509|GO:0005544
Spst11g00173 314 Pfam Annexin 87 152 IPR018502 GO:0005509|GO:0005544
Spst11g00173 314 Pfam Annexin 172 225 IPR018502 GO:0005509|GO:0005544
Spst11g00173 314 Pfam Annexin 259 309 IPR018502 GO:0005509|GO:0005544
Spst11g00173 314 FunFam Annexin 83 152 - -
Spst11g00173 314 Gene3D Annexin 83 149 IPR037104 GO:0005509|GO:0005544
Spst11g00173 314 FunFam annexin D4 153 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00173 Spst-Chr11 7057309 7060579 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00173 11 7057309 7060579 Spst11g00173 11 7057309 7060579 ECH