Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00167 ATGAACATAATGTCACAATCTCTTGTTTTGGTTTTACTGTGTCTTTACAACCTCTCCTTCTCAGAAGGTTTCAATGGTGGATTCAGTGTGGAGATCATCCACCGTGATTCACCAAAATCACCATTCTATCGTTCCACAGAAACTCACTTCCAAAGGGTTTCCAATGCTATACGTCGTTCCATTAACCGTGTCAATAATTTAAACCAATTATCTTCTGTGTCTGCAAACACACCCCAGGCTCCTGTCACACCAGATTTAGGTGAATACCTGATGAGCTATTCAGTTGGAACCCCACCATTCCATGTCTTTGGAATTGTTGATACTGGTAGTGACATCATTTGGTTGCAATGCCAACCATGTAAAAATTGTTTTAATCAATCTAGTCCTATATTTGATTCTTCAAAGTCAAAAACATACAAAACCATGCCATGCTCTTCCAATGCATGTCATTCTGTATTAGGTACCTCTTGCTCCTCTGACAGTAGCAAACATTGTGAATATGCTATTAACTTTGGTGATGGCTCACACTCACAAGGAGATCTTAGTGAGGAGACCCTCACTTTTGCCTCCACCAAAGGCTCTCCTATCCAACTTCCTGGAACTGTGATAGGATGTGGACATGACAATGCCATTCCCTCTCATACGAACAATTCTGGCGTAGTTGGCCTAGGACACGGATCTGCGTCCCTTATAACCCAATTGGGTTCTTCAATAGGTTGGAAGTTTTCTTATTGTCTGGTACCAACACTTTCAAAATCTATTTCATCTAGCAAACTCAATTTTGGAGATGCTGCTGTGGTTTCTGGAAATGGTGCTGTCTCAACCCCGTTATTCTCAAAGAATGATGTGCTTTACCACCTAACCTTGGAAGCATTCAGTGTGGGAGGTACTAGAATAGAATTTGGACAATCTGGTGGAAAGGGAAATGCCATAATTGACTCAGGTACAACACTCACTCTTTTGCCAAATGATGTTTACTCAAAGTTGGAATCAGCAGTTGCAAGTGCAGTTAAGTTGCGGCGTACTAAGGATCCAAATCAAGTTTTGAGCCTTTGCTACGAAGCTAAATCTGATAAACTAGATGTACCAGTGATCACAGCACATTTTAGCGGTGCTGATGTCCTTTTATATTCTATCAGCACCTTCATTCCTGTGGCTGATGGAGTTGTGTGCTTTGCTTTCATCCCAAGTCAAATTGGTGCTGTCTTTGGGAATTTGGCTCAGCAAAACCTTTTGGTCGGCTATGACCTAAAACAAAATACAGTGTCCTTTAAGAACACAGATTGCACTAAGCAATGGTAG 1302 0.4132 MNIMSQSLVLVLLCLYNLSFSEGFNGGFSVEIIHRDSPKSPFYRSTETHFQRVSNAIRRSINRVNNLNQLSSVSANTPQAPVTPDLGEYLMSYSVGTPPFHVFGIVDTGSDIIWLQCQPCKNCFNQSSPIFDSSKSKTYKTMPCSSNACHSVLGTSCSSDSSKHCEYAINFGDGSHSQGDLSEETLTFASTKGSPIQLPGTVIGCGHDNAIPSHTNNSGVVGLGHGSASLITQLGSSIGWKFSYCLVPTLSKSISSSKLNFGDAAVVSGNGAVSTPLFSKNDVLYHLTLEAFSVGGTRIEFGQSGGKGNAIIDSGTTLTLLPNDVYSKLESAVASAVKLRRTKDPNQVLSLCYEAKSDKLDVPVITAHFSGADVLLYSISTFIPVADGVVCFAFIPSQIGAVFGNLAQQNLLVGYDLKQNTVSFKNTDCTKQW 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00167 433 Gene3D Acid Proteases 262 432 IPR021109 -
Spst11g00167 433 PANTHER OS07G0603500 PROTEIN-RELATED 30 430 - -
Spst11g00167 433 SUPERFAMILY Acid proteases 85 431 IPR021109 -
Spst11g00167 433 ProSiteProfiles Peptidase family A1 domain profile. 89 425 IPR033121 -
Spst11g00167 433 CDD pepsin_A_like_plant 88 429 IPR034161 -
Spst11g00167 433 Gene3D Acid Proteases 66 261 IPR021109 -
Spst11g00167 433 FunFam Aspartic proteinase CDR1 264 432 - -
Spst11g00167 433 FunFam Probable aspartic protease At2g35615 68 262 - -
Spst11g00167 433 Pfam Xylanase inhibitor C-terminal 285 425 IPR032799 -
Spst11g00167 433 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 310 321 IPR001969 GO:0004190|GO:0006508
Spst11g00167 433 Pfam Xylanase inhibitor N-terminal 89 263 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00167 Spst-Chr11 6995583 6996884 Tandem