Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00166 ATGTCAAATAATTCCTCAGTTCTTGTTCTTGTTTTGCTGTCTCTTTGCAGCATCTCTTTCTTGGAGTCTCTCAATGGTGGGTTTAGTGCGGAGATAATCCACCGTGACTCATCAAAGTCACCGTTCTATCGTCCCGCAGAAACCCAATTCCAACGAGTTGCTAATGCGGTGCGTCGTTCCATTAATCGTGCTAAACATTTCAACAGAAGTTCAGTGCATCCAAACACACCTAAGGCTGCTATAACAAAAAATGATGGTGAATACCTTGTGAGATATTCAGTTGGAACCCCACCATTCCAAGTTTATGGTATTGCTGATACAGGAAGTGACATAATTTGGTTGCAGTGTCAACCTTGTGAAACCTGTTACAACCAAACCACTCCAATATTTGATCCTTCAAAATCCTACACATACAAAACCCTTCCTTACTCTTCTACTGCATGTCAATCAGTGCAAGATACCTCCCAATACGGGAACAGTTGTGAATATACTATTTACTATGGGGATGGGTCACACTCACTAGGAGATCTTAGTGTGGAAACACTCACTTTAGGCTCCACCAATGGCTCTTCAATCCAATTTCCTAGAACTGTGATAGGATGTGGACGTAACAATACTGTGTCCTTTGGAGGGAAAAGCTCTGGTGTAGTTGGTCTAGGAAGAGGACCTGTGTCTCTTATATCTCAATTGGGTTCTTCAATAGGTGGAAAATTTTCCTATTGTTTGGCACCAAGGTCTAATGTTTCTAGCAAACTCAATTTTGGAAATGCTGCTGTGGTTTCTGGGAAAGGGACTGTATCAACTCCCATTCTCTCACTTGACCCAAAAGTATTTTACTTCCTAACCTTGAAATCATTCAGTGTGGGAAACAAAAGAATAGAGTTTAGGAGCTCCTCATCTACACCTGGTGGAGAGGGAAAGATCATAATTGACTCAGGTACAACTCTCACTCTTTTGCCAGATGATATTTACTCAAAGTTGGAATCTGCAGTAGCAAATGCAATTGAATTAGAGCGTGTTCAGGATCCATTTAAACAGTTGAGCCTTTGCTATAATAGCAGTTTTGAGGATCTAGAAGCACCAGCGATCATGGCACATTTTAGTGGTGCAGATATCAAGTTAAAAGCTATCAACACGTTTGTTGAAGTGGAAGAAGGGATAGTATGCTTGGCTTTCATGTCAAGTCAAATTGGTCCCATCTTTGGGAACATAGCTCAGTTAAACTTCTTGGTAGGCTATGACCTTGAAAAGAAAAAAGTCTCCTTTAAACCCACAGACTGTACTAAGCGGTGA 1293 0.4107 MSNNSSVLVLVLLSLCSISFLESLNGGFSAEIIHRDSSKSPFYRPAETQFQRVANAVRRSINRAKHFNRSSVHPNTPKAAITKNDGEYLVRYSVGTPPFQVYGIADTGSDIIWLQCQPCETCYNQTTPIFDPSKSYTYKTLPYSSTACQSVQDTSQYGNSCEYTIYYGDGSHSLGDLSVETLTLGSTNGSSIQFPRTVIGCGRNNTVSFGGKSSGVVGLGRGPVSLISQLGSSIGGKFSYCLAPRSNVSSKLNFGNAAVVSGKGTVSTPILSLDPKVFYFLTLKSFSVGNKRIEFRSSSSTPGGEGKIIIDSGTTLTLLPDDIYSKLESAVANAIELERVQDPFKQLSLCYNSSFEDLEAPAIMAHFSGADIKLKAINTFVEVEEGIVCLAFMSSQIGPIFGNIAQLNFLVGYDLEKKKVSFKPTDCTKR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00166 430 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 308 319 IPR001969 GO:0004190|GO:0006508
Spst11g00166 430 FunFam Aspartic proteinase CDR1 257 430 - -
Spst11g00166 430 FunFam Probable aspartic protease At2g35615 67 255 - -
Spst11g00166 430 Pfam Xylanase inhibitor N-terminal 88 256 IPR032861 -
Spst11g00166 430 Gene3D Acid Proteases 64 254 IPR021109 -
Spst11g00166 430 PANTHER OS07G0603500 PROTEIN-RELATED 31 428 - -
Spst11g00166 430 SUPERFAMILY Acid proteases 83 427 IPR021109 -
Spst11g00166 430 Pfam Xylanase inhibitor C-terminal 279 423 IPR032799 -
Spst11g00166 430 CDD pepsin_A_like_plant 87 427 IPR034161 -
Spst11g00166 430 Gene3D Acid Proteases 255 430 IPR021109 -
Spst11g00166 430 ProSiteProfiles Peptidase family A1 domain profile. 88 423 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00166 Spst-Chr11 6931539 6932831 Tandem