Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00122 ATGACAGCAACTTCACTTTCATCTACTTTGGCTCTTGTTTTACTGGTTCTTTACATCTCCTCTCTCTTAGAGGCTATCAATGGAGGGTTCAGTGTGGAGATCATCCACCGTGACTCAACAAAATCACCATTCTATCGTCCCACAGTAACTCAGTTCCAACGAGTTGTGAATGCTGTGCGTCGCTCCATTAATCGTGCTAACCATTTCAACAGAACTTTTGTCTCTCCAAACACAGCTGAGGCCACTGTAACACCAGAACTAGGTGACTACATCATGAGCTATTCAGCTGGAACCCCACCATTCCAAGTTTATGGTATTGTTGACACAGGAAGTGACATAGTTTGGCTGCAGTGTCATCCTTGTAAAACTTGTTACAACCAAATCACTCCAATTTTTAATCCTTCAAAATCCAATACCTTCAAAACCCTTCCTTATTCTTCTGCTACATGCAAATTAGTGCCGGGTACCTCTTGCTCTTCACATAAAGGGGGAATTTGTGAATATAGTATTAGCTATGCGGATGGGACATACTCACAAGGAGATCTTATTGGGGAGACACTCACTTTAGGCTCCACCAATGGCTCTTCTGTCCAACTTCCTAGAACTGTGATAGGATGTGGACGTGACAATAGGTTTTCCTCTGAAGAGAAAAGTTCTGGCATAGTTGGTTTAGGACTCGGACCTTTGTCTCTAATATCACAATTGAGTTCTTCAATAGGTGGAAACTTTTCCTATTGTCTTTCACCAACAGATAACCTACCTAGCAAAATCAGTTTTGGAGCTGCTTCTATGGTTTCTGGGAATGGCACTGTTTCGACCCCATTAGGCCATCATCATCGAGAAACACATTACTACCTAACCCTGGAAGCATTCAGTGTTGGAAACAACAGAATAAAGTTCGGAAACTCCTCATCAGAATCTGATGGAGAGGGAAACATCATAATTGACTCAGGAACAACTCTCACTCTTTTGCCAGATGATGTTTATTCAAATTTGGAATCAGCAGTGGCAGATGAAGTTAAGCTAAAGCGAGCTAAGGATCCACTGGAACAGTTGACCCTTTGCTATGAAGGGAAATTTCATGAACAACATGCACCAGTTATCACAGCACATTTTAGTGGTGATGCAGATGTGAAGTTAAATGTTGAGAACTCCTTTATTGATGCGGGTGATGGGGTAGTATGCTTTGCTTTCCTATCAAGTAAAACTTTTTCCATCTTTGGAAACTTGGCTCAGAGAAACCTCTTGGTTGGCTACGACCTCCAAAAGAAAATGGTCTCCTTTAAGCCCACAGATTGTACTAAACAGTGA 1311 0.418 MTATSLSSTLALVLLVLYISSLLEAINGGFSVEIIHRDSTKSPFYRPTVTQFQRVVNAVRRSINRANHFNRTFVSPNTAEATVTPELGDYIMSYSAGTPPFQVYGIVDTGSDIVWLQCHPCKTCYNQITPIFNPSKSNTFKTLPYSSATCKLVPGTSCSSHKGGICEYSISYADGTYSQGDLIGETLTLGSTNGSSVQLPRTVIGCGRDNRFSSEEKSSGIVGLGLGPLSLISQLSSSIGGNFSYCLSPTDNLPSKISFGAASMVSGNGTVSTPLGHHHRETHYYLTLEAFSVGNNRIKFGNSSSESDGEGNIIIDSGTTLTLLPDDVYSNLESAVADEVKLKRAKDPLEQLTLCYEGKFHEQHAPVITAHFSGDADVKLNVENSFIDAGDGVVCFAFLSSKTFSIFGNLAQRNLLVGYDLQKKMVSFKPTDCTKQ 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00122 436 Pfam Xylanase inhibitor C-terminal 283 429 IPR032799 -
Spst11g00122 436 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 313 324 IPR001969 GO:0004190|GO:0006508
Spst11g00122 436 SUPERFAMILY Acid proteases 88 433 IPR021109 -
Spst11g00122 436 ProSiteProfiles Peptidase family A1 domain profile. 90 429 IPR033121 -
Spst11g00122 436 Gene3D Acid Proteases 260 436 IPR021109 -
Spst11g00122 436 Gene3D Acid Proteases 66 259 IPR021109 -
Spst11g00122 436 FunFam Probable aspartic protease At2g35615 69 260 - -
Spst11g00122 436 Pfam Xylanase inhibitor N-terminal 90 260 IPR032861 -
Spst11g00122 436 FunFam Aspartic proteinase CDR1 262 436 - -
Spst11g00122 436 PANTHER OS07G0603500 PROTEIN-RELATED 32 434 - -
Spst11g00122 436 CDD pepsin_A_like_plant 90 433 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00122 Spst-Chr11 2765760 2767070 Tandem