Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00121 ATGACAATAATGTCAGACTATTCATATCTGGTGTTGCTTTTTTTGTGTCTTTGCAACCTCTCTTCTTCAGAAGCTATCATCGATGGATTCAGTGTGGAGATAATCCACCGTGACTCATCAAAATCACCATTCTATCGTTCCACAGAAACTCAATTCCAAAGAACTGCTAATGCCCTGAGTCGTTCCATTATCCGTGTCAATCATTTCAACCAATCTTTTGTGTCTCAAAACACACTTCAGGCCCCAGTAACCTCAGCTCCAGGTGAATATCTAGTGAAGTATTCAGTTGGAAGCCCTCCACTCCCGGTCTATGGAATTGTTGATACGGGTAGTGACATTACTTGGCTGCAATGCCAACCATGTATAAAAAGTTACAAGCAAATCACTCCTATCTTTGATCCTTCAAAATCCAAAACATACAAAACCATCCCTTGCACTTCCAGTACATGTCGTTTAGTACAAGGTACTTCTTGCCCCTCGGCCACTAGCAATTGTGTATATACTATTGACTATGCTGATGAGACACACTCACAAGGAGATCTTAGTGAAGAGACCCTTACTTTACTCTCCACCAATGGCTCTCCTATCCAAATTCCTCGAATTGCATTTGGATGTGGTCATATCAATGCTGTTTCCTTTGAAAGAGGAAATTCTGGCATATTTGGCTTAGGACGCGGAGCTGTATCCCTTATAAATCAATTGCGCTCTTCAATAGGTGGAAAGTTTTCTTATTGTTTGGTACCAGCACATTCACAATCTACTGTATCTAGCAAACTCAATTTTGGAGATGCTGCTGTGATTTCTGGGCCTGGGACTTTCTCAACCCCATTATTTGCACAAAATCGAGAACCATTTTATTACCTACACTTAGAAGCATTTAGTGTCGGACGCAATAGAATAGAGTTTGGAAGTTCTTCATCTAAACCTGGTGGAAATGGAAATATCATAATTGACTCAGGTACAACACTCACTTTTTTGCCAAATGATGTTTACTCAAAGTTGGAATCAGGAGTTGCAAGTGCAGTTAAGTTGCCGCGTGCTAAGGATCCTAATCAAGTGTTGAGACTCTGCTACAAAGCTAATAGCATAAATGCACCAGTGATCACAGCACATTTTACTGGTGCAGATGTCATTTTATATGGTCTCAACACCTTTGTTCATGTGACAGATGAGGTTGCATGTTTGGCTTTCCTGCCAAGTCAAACTGGTGCTGTCTTTGGGAACTTGGCTCAGCAAAACATTTTGGTCGGCTATGACCTTCAGAAGAACACAGTGTCCTTTAAACTCGCAGATTGTTCTAAGCAGTGA 1308 0.4106 MTIMSDYSYLVLLFLCLCNLSSSEAIIDGFSVEIIHRDSSKSPFYRSTETQFQRTANALSRSIIRVNHFNQSFVSQNTLQAPVTSAPGEYLVKYSVGSPPLPVYGIVDTGSDITWLQCQPCIKSYKQITPIFDPSKSKTYKTIPCTSSTCRLVQGTSCPSATSNCVYTIDYADETHSQGDLSEETLTLLSTNGSPIQIPRIAFGCGHINAVSFERGNSGIFGLGRGAVSLINQLRSSIGGKFSYCLVPAHSQSTVSSKLNFGDAAVISGPGTFSTPLFAQNREPFYYLHLEAFSVGRNRIEFGSSSSKPGGNGNIIIDSGTTLTFLPNDVYSKLESGVASAVKLPRAKDPNQVLRLCYKANSINAPVITAHFTGADVILYGLNTFVHVTDEVACLAFLPSQTGAVFGNLAQQNILVGYDLQKNTVSFKLADCSKQ 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00121 435 Gene3D Acid Proteases 262 435 IPR021109 -
Spst11g00121 435 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 105 116 IPR001969 GO:0004190|GO:0006508
Spst11g00121 435 Gene3D Acid Proteases 67 261 IPR021109 -
Spst11g00121 435 FunFam Probable aspartic protease At2g35615 69 262 - -
Spst11g00121 435 Pfam Xylanase inhibitor C-terminal 286 428 IPR032799 -
Spst11g00121 435 CDD pepsin_A_like_plant 89 432 IPR034161 -
Spst11g00121 435 PANTHER OS07G0603500 PROTEIN-RELATED 32 433 - -
Spst11g00121 435 ProSiteProfiles Peptidase family A1 domain profile. 90 428 IPR033121 -
Spst11g00121 435 FunFam Aspartic proteinase CDR1 264 435 - -
Spst11g00121 435 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 315 326 IPR001969 GO:0004190|GO:0006508
Spst11g00121 435 Pfam Xylanase inhibitor N-terminal 90 263 IPR032861 -
Spst11g00121 435 SUPERFAMILY Acid proteases 85 433 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00121 Spst-Chr11 2725893 2727200 Tandem