Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00120 ATGTCAGGCTATTCATCTTTAGTTTATGTTTTACTGTGTCTTTGCAACCTCTCTTCTTCAGAAGCTATCATCGATGGATTCAGTGTGGAGATAATCCACCGTGACTCATCAAAATCACCATTCTATCGTTCCACAGAAACTCAATTCCAAAGAACTGCTAATGCCCTGAGTCGTTCCATTATCCGTGTCAATCATTTCAACCAATCTTTTGTGTCTCAAAACACACTTCAGGCCCCAGTAACCTCAGCTCCAGGTGAATATCTAGTGAAGTATTCAGTTGGAAGCCCTCCACTCCCGGTCTATGGAATTGTTGATACGGGTAGTGACATTACTTGGCTGCAATGCCAACCATGTATAAAATGTTACAAGCAAATCACTCCTATCTTTGATCCTTCAAAATCCAAAACATACAAAACCATCCCTTGCCCCTCGGCCACTAGCAATTGTGTATATACTATTGACTATGCTGATGAGACACACTCACAAGGAGATCTTAGTGAAGAGACCCTTACTTTACTCTCCACCAATGGCTCTCCTATCCAAATTCCTCGAATTGCATTTGGATGTGGTCATATCAATGCTGTTTCCTTTGAAAGAGGAAATTCTGGCATATTTGGCTTAGGACGCGGAGCTGTATCCCTTATAAATCAATTGCGTTCTTCAATAGGTGGAAAGTTTTCTTATTGTTTGGTACCAGCACATTCACAATCTACTATATCTAGCAAACTCAATTTTGGAGGTGCTCCTGTGATATCTGGGCCTGGGACTGTCTCAACCCCATTATTTGCACAAAATCGAGAACCATTTTACTACCTACACTTAGAAGCATTTAGTGTCGGAAGCAATAGAATAGAGTTTGGAAGCTCTTCATCTAAACCTGGTGGAAATGGAAATATCATAATTGACTCAGCAGTTGCAAGTGCAGTTAACTTGAAGCGTGCTAAGGATCCAAATCAAGTGTTGAGTCTTTGCTACAAAGCTAATAGACTTGATGCACCAGTGATCACAGCACATTTTACTGGTGCAAATGTCATTTTGTATGGTCTCAACACCTTTGTTCAAGTGGCCGATGAGGTTGTATGCTTGGCTTTTCTGCCAAGTGTAACTGGTGCTGTCTTCGGAAACTTGGCTCAGCAAAACATTTTGGTTGGCTCAGCAAAACATTTTGGTACAGTATCATTCAAGCTTGCAGATTGCACTAAGCAATGA 1209 0.4111 MSGYSSLVYVLLCLCNLSSSEAIIDGFSVEIIHRDSSKSPFYRSTETQFQRTANALSRSIIRVNHFNQSFVSQNTLQAPVTSAPGEYLVKYSVGSPPLPVYGIVDTGSDITWLQCQPCIKCYKQITPIFDPSKSKTYKTIPCPSATSNCVYTIDYADETHSQGDLSEETLTLLSTNGSPIQIPRIAFGCGHINAVSFERGNSGIFGLGRGAVSLINQLRSSIGGKFSYCLVPAHSQSTISSKLNFGGAPVISGPGTVSTPLFAQNREPFYYLHLEAFSVGSNRIEFGSSSSKPGGNGNIIIDSAVASAVNLKRAKDPNQVLSLCYKANRLDAPVITAHFTGANVILYGLNTFVQVADEVVCLAFLPSVTGAVFGNLAQQNILVGSAKHFGTVSFKLADCTKQ 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00120 402 CDD pepsin_A_like_plant 86 399 IPR034161 -
Spst11g00120 402 Gene3D Acid Proteases 307 400 IPR021109 -
Spst11g00120 402 Gene3D Acid Proteases 253 306 IPR021109 -
Spst11g00120 402 Pfam Xylanase inhibitor N-terminal 87 247 IPR032861 -
Spst11g00120 402 Pfam Xylanase inhibitor C-terminal 310 384 IPR032799 -
Spst11g00120 402 SUPERFAMILY Acid proteases 82 399 IPR021109 -
Spst11g00120 402 PANTHER OS07G0603500 PROTEIN-RELATED 29 400 - -
Spst11g00120 402 Gene3D Acid Proteases 64 246 IPR021109 -
Spst11g00120 402 FunFam Aspartyl protease AED1 67 246 - -
Spst11g00120 402 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 102 113 IPR001969 GO:0004190|GO:0006508
Spst11g00120 402 ProSiteProfiles Peptidase family A1 domain profile. 87 395 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00120 Spst-Chr11 2715831 2717089 Tandem