Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00119 ATGTCACACTCTTTATCTCTAGCTTTTGTTTTACTGGGTCTTTACAACCTGTCTTTCTTAGAAGCTGTCAATGGTGGATTTAGTGTGGATATCATCCACCGTGATTCACCAAAATCACCGCTCTATAGTTCCATAGAAACTCAATTCCAACGGATTGCCAATGCCGTACGTCGTTCTATTAATCGTGTCAATCATTTCAACCAATCTTTTGTGTCTCCAAACACACCGAAGTCCACTGTAATACCAGACTTTGGTGAATACCTAATGAGGTATTCAGTTGGAACCCCACCCATCAACATCTATGGAATTGTTGATACGGGTAGTGACTTTGTTTGGTTGCAATGCCAACCTTGTAAAAAATGTTACAAACAAAGCAATCCTATCTTTGATTCTAAAAAATCCGTGACATACAAAACCATCCCTTGCACTTCTAATAAATGTGGTTCTGTGCTAGGTACCTTTTGCTCCTCGGGCATTGTGAAACATTGTGAATATAACATAAACTATGAGGATGGGACACTCTCACAAGGAGATCTTGGTGAGGAGACCCTCACTTTAGGTTCCACCAATGGCTCTCCAATCCAGTTTCCTGGAACTGTGATAGGATGTGGTCGTTACAATGAAATTGCCTTTAAAGGGGTAAATTCCGGCATAGTTGGTCTAGCACGTGGACCTGTGTCCCTTATAACTCAATTAGGTCCTTCAGTGGGTTGGAAGTTTTCCTATTGTTTGGTCCCAGCAATTTCAAAATCCAATTCAACTAGCAAACTCAATTTTGGAGATGCTGCTATGGTTTATGGGCCTGGGACTGTCTCAACCCCATTATTATTACAAAATAGGCAAGCATTTTATTACCTAACCTTAGAAGCATTAAGTGTTGGAAGCAATAAAATAGAGTTTGGAAGCTCTATGTCTAGATCTGGTGGAAATGGAAATATCATAATTGATTCAGGTACAACACTCACTCTTTTGCCAAATGATGTTTACTCAAAGTTGGAATCAGCAATTGCAAATGCAGTTAAGTTGCAGCGCGCTAAGGATCCAAATCAAGTTTTGAGCCTTTGCTACAAAGCTAAGTCTGATAAACTTGATGTACCAGTGATCACAGCACACTTTACAGGTGCAGATGTCTTTTTATATGCTCTCAACACCTTTACTCAAGTGGCTGAGGAGATTGTATGTTTGGCTTTCCTGCCAAGTCAAACTGGTGCTGTCTTTGGCAACTTGGCTCAGCAAAACATTTTGGTTGGCTATGACCTTCAGAAGAACACAGTGTCCTTTAAGCTCGCAGATTGCACTCAGCAGTAA 1308 0.406 MSHSLSLAFVLLGLYNLSFLEAVNGGFSVDIIHRDSPKSPLYSSIETQFQRIANAVRRSINRVNHFNQSFVSPNTPKSTVIPDFGEYLMRYSVGTPPINIYGIVDTGSDFVWLQCQPCKKCYKQSNPIFDSKKSVTYKTIPCTSNKCGSVLGTFCSSGIVKHCEYNINYEDGTLSQGDLGEETLTLGSTNGSPIQFPGTVIGCGRYNEIAFKGVNSGIVGLARGPVSLITQLGPSVGWKFSYCLVPAISKSNSTSKLNFGDAAMVYGPGTVSTPLLLQNRQAFYYLTLEALSVGSNKIEFGSSMSRSGGNGNIIIDSGTTLTLLPNDVYSKLESAIANAVKLQRAKDPNQVLSLCYKAKSDKLDVPVITAHFTGADVFLYALNTFTQVAEEIVCLAFLPSQTGAVFGNLAQQNILVGYDLQKNTVSFKLADCTQQ 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00119 435 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 313 324 IPR001969 GO:0004190|GO:0006508
Spst11g00119 435 FunFam Probable aspartic protease At2g35615 66 260 - -
Spst11g00119 435 Pfam Xylanase inhibitor N-terminal 87 261 IPR032861 -
Spst11g00119 435 SUPERFAMILY Acid proteases 83 432 IPR021109 -
Spst11g00119 435 CDD pepsin_A_like_plant 86 432 IPR034161 -
Spst11g00119 435 Gene3D Acid Proteases 260 435 IPR021109 -
Spst11g00119 435 Pfam Xylanase inhibitor C-terminal 284 428 IPR032799 -
Spst11g00119 435 FunFam Aspartic proteinase CDR1 262 435 - -
Spst11g00119 435 ProSiteProfiles Peptidase family A1 domain profile. 87 428 IPR033121 -
Spst11g00119 435 PANTHER OS07G0603500 PROTEIN-RELATED 29 433 - -
Spst11g00119 435 Gene3D Acid Proteases 64 259 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00119 Spst-Chr11 2712941 2714248 Tandem