Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00114 ATGCATGACGTTTTATCATTGAAGCTAGATGAATGGACAGATGAACAAGTTGATGCACTGGAAAAAATGGGAGGAAACACATTGTTAAATAAGAAGTACGAAGCTTGCCTCCCAAGTAACATGGCAAAACCAAAACCACATTCTTCCATCGAAGAGCGCTCTGAATTTATTCGGAGAAAATATGAGCTGCAACAATTTATGGAGAGTGATGACCATATGACAGGCCCCATTGTCCCATCTCAAGGAAGAAGTATATCACTTGCTCAGTGCAGTTCTTCATACTATAATGCAGTCATGGACAAAAAACCATCTGAAAAACATCCAAGCAAAATTCGTATTGGGAATGCATTGCGCAATAGTTGGGGAAAAAAAGAAGCTGATCACAAGCCAAAGAAGAGTACCTCATTGGCAGGTATGGTTGAATTTGTTGGGTTGATTAAGGTTAATGTGGTTAAAGGCACTCACCTAGCTGTTCGAGACGTAATGACTAGTGACCCTTATGTTATCCTTTCTTTGGGTCACCAATCAGTAAAAACACGAGTCATAAAAAACAATTTGAATCCAGTGTGGAATGAAAGTCTAATGCTATCAATTCCAGAGAACATTCCTCCTCTAAAAGTGCTTGTGTATGACAAGGATACATTTTCAACTGATGATTTTATGGGAGAGGCTGAAATAGACATTCAACCTCTAGTTATAGCAGCAAAGGCCTACGAGAAATCGAACATCAATGAGTCCATGCAGCTTGGTAAATTCGTAGCAAGCAAGGACAACACCCTTGTTAGAGATGGAATCATATCCCTTGATGAAGGAAAGATCAAACAGGAGATCTCAGTGAGGCTTCAGAACATTGAGAGAGGTGAACTTGAGCTTGAGCTTGAGTGTGTTCCTCTTACTCAGTAG 903 0.4009 MHDVLSLKLDEWTDEQVDALEKMGGNTLLNKKYEACLPSNMAKPKPHSSIEERSEFIRRKYELQQFMESDDHMTGPIVPSQGRSISLAQCSSSYYNAVMDKKPSEKHPSKIRIGNALRNSWGKKEADHKPKKSTSLAGMVEFVGLIKVNVVKGTHLAVRDVMTSDPYVILSLGHQSVKTRVIKNNLNPVWNESLMLSIPENIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVIAAKAYEKSNINESMQLGKFVASKDNTLVRDGIISLDEGKIKQEISVRLQNIERGELELELECVPLTQ 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00114 300 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 142 300 - -
Spst11g00114 300 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 141 235 IPR035892 -
Spst11g00114 300 SMART C2_3c 145 240 IPR000008 -
Spst11g00114 300 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 3 300 IPR044518 GO:0005096|GO:0005543
Spst11g00114 300 Pfam C2 domain 145 231 IPR000008 -
Spst11g00114 300 Gene3D C2 domain 143 300 IPR035892 -
Spst11g00114 300 SUPERFAMILY ArfGap/RecO-like zinc finger 3 67 IPR037278 -
Spst11g00114 300 ProSiteProfiles C2 domain profile. 126 242 IPR000008 -
Spst11g00114 300 Pfam Putative GTPase activating protein for Arf 2 69 IPR001164 GO:0005096
Spst11g00114 300 Gene3D Arf GTPase activating protein 1 74 IPR038508 -
Spst11g00114 300 CDD C2_ArfGAP 143 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00114 Spst-Chr11 2472489 2478686 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g02123 5 56617993 56622081 Spst11g00114 11 2472489 2478686 PCT