Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst11g00109 | ATGATGTATAATGATCCGCAGCACCAGCCGCACCAGTACCAGCAGCAGCAGCAACAGCAGCAGCCGCATTTCCACCACCAGCCACCGGGACCGGAGTTCCATCGGGGACCGCCGCCATCTTCGCAGGCGCCGCCGGTGATGCGGCAAGGCTCCGCTTCGTCGACGAACCTCGCCCCCGAGTTTCACCACCCCGGCCCCGGAGGAGCCCCTCCCCCTCATTACGATGTTCACAGTGATAGCCATGGTGCAAAAAGAATACGAAAGCTTACTCAAAGGAAAGCAGTTGATTACACAAGCACTGTTGTGCGTTACATGCAGATTCGTATGTGGCAGCGGGATTGGAGGGATAGGACAGTACTGCAACCTACCCCGGCAGCTGCAATTGATATGTTGCCAGCAGTTGGCTATCCAGACAACCCATCCACAAGCTTTGCTGCTAAATTTGTTCATACATCTCTAAATAAAAATCGTTGCCCCATTAATCGCGTTCTTTGGACTCCAACAGGCCGGCGACTTATTACTGGCTCACAGACTGGGGAATTCACTCTTTGGAATGGACAATCTTTTAATTTTGAAATGATTCTTCAGGCTCATGATCAAGCAATCAGGTCCATGGTATGGAGTCACAATGACAACTGGATGGTCTCTGGTGATGATGGAGGCGCTATAAAGTATTGGCAGAACAACATGAACAATGTGAAAGCTAACAAATCTGCTCATAAAGAATCTGTTCGTGACTTAAGGACAGATTTGAAGTTCTGTTCGTGCTCTGATGATACCACAGTTAAGGTTTGGGATTTTGCACGCTGTCAAGAAGAGTGCTCATTAACTGGTGGAAAGGACAATCTTGTGAAACTTTGGGATGCTAAAACAGGGAGAGAGCTTTGTTCATTCCATGGCCACAAAAATACTGTGCTATGTGTCAAATGGAATCAAAATGGCAACTGGGTGTTGACAGCTTCAAAGGATCAAATAATAAAGCTTTATGACATAAGAGCAATGAAGGAGCTTGAATCATTCCGTGGACATCGAAAGGATGTTACTGGTTATAGTAAAACTGAATGGTGGAAATGTCCTTCAATTCATTCCTCCGTGCTAAGAATTGGTATTCCTAGTGCTGTGTGGTGTTACTGGGACTCTTTGGCATGGCATCCATTCCATGAAGAGTACTTTGTGAGTGGGAGTTATGATGGTTCCATCTTCCATTGGCTTGTTGGGCATGAAACTCCCCAAATTGAAATTGTCAATGCTCATGATAATAACGTGTGGGATCTTGCATGGCATCCTATTGGATACCTTCTGTGCAGTGGTAGCAGTGATCATACAACAAAGTTTTGGTGCAGAAATAGGCCAGGAGACACTGCTCGTGATAGATTTAACACTGGCATGCAAGGATGGAGAGAACTGTGGATGGTAATGCTTTTAGTTAGAAGCAATGTCTGTTTTGAGAGACAACCGATTTATGAAGTGTTTGACATTAGTTTGAATATATTCATGTCAGGATATGCTGATCCAAATCCTGTTGCTGGTCGGGTGGGTGGTAATTTTCCAATGGCTGAAGGCCCAACAACTCCAGGACCATTTGCCCCTGGGTTAACTCGAAACGAGGGTACCATTCCAGGTGTTGGAGTTGCAATGCCCTTATCTATTCCTTCTCTTGACATGGCTCAAGGAGAGCAGAAGCAGCCCCATCCTGTTCCAATGGGTGCTCCTCCTCTTCCCCCAGGTCCACATCCCTCTCTTCTTAATGCCAACCAACAACAACCATATCAACAGAATCCTCAGCAGATGCCGCCACAACATCAACACCAGGGTCTACCACAGCAGATGGGTCCTTTGCCTATGCCTCCAAATATGCCCCAACTACAGCACCCTTCCCACTCACCCATGGTCCCTCACCAGCATTTACCTCGTCCTCCTCCCCAAATGCCTATTGGCATGCCAGGATCTCTACCAGGGATTTCATCAGTGCCTACATCGCATCCAATGCAAATGCCTGGTCCAATGATGTATCTATCAGATGCATATCGGTTTTTGGATGTGTTAGACACTTGTGCATTTGCAGTATCTCAGCTTCGTAGGTGTAAACAGAGTATTGTTGCTTTCACTGTTTTTGGTATGCAAGGGGCGATGAATCAAATGGGTACTCCAATGCCACAAGGTCCTTACGTGGGCATGAATCAAATGCATTCAGGATCCTTGCCTACTAGTGGAGGGCCACCTCTTGGTGGTTTTCCAGGCAGCATGCCTAATATGCAAGGCCCATCAAATGCCAATTATCCCCAAGGTGCTTCATTTAACAGACCTCAAGGTGGTCAAATGCCTTTGATGCAAGGGTATAATCCTTACCAGTCTAGTGCCAAGAAATGCCTGTTGACCGAGGCGAAGAAACCTCAACTCAGTGAGTCACCGCTAAAGAAGAGGTTTAAGGATCATGATGATGCAGACTTGCTGCTGTCCAAGATGCTGTGA | 2472 | 0.4684 | MMYNDPQHQPHQYQQQQQQQQPHFHHQPPGPEFHRGPPPSSQAPPVMRQGSASSTNLAPEFHHPGPGGAPPPHYDVHSDSHGAKRIRKLTQRKAVDYTSTVVRYMQIRMWQRDWRDRTVLQPTPAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLRTDLKFCSCSDDTTVKVWDFARCQEECSLTGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTGYSKTEWWKCPSIHSSVLRIGIPSAVWCYWDSLAWHPFHEEYFVSGSYDGSIFHWLVGHETPQIEIVNAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDTARDRFNTGMQGWRELWMVMLLVRSNVCFERQPIYEVFDISLNIFMSGYADPNPVAGRVGGNFPMAEGPTTPGPFAPGLTRNEGTIPGVGVAMPLSIPSLDMAQGEQKQPHPVPMGAPPLPPGPHPSLLNANQQQPYQQNPQQMPPQHQHQGLPQQMGPLPMPPNMPQLQHPSHSPMVPHQHLPRPPPQMPIGMPGSLPGISSVPTSHPMQMPGPMMYLSDAYRFLDVLDTCAFAVSQLRRCKQSIVAFTVFGMQGAMNQMGTPMPQGPYVGMNQMHSGSLPTSGGPPLGGFPGSMPNMQGPSNANYPQGASFNRPQGGQMPLMQGYNPYQSSAKKCLLTEAKKPQLSESPLKKRFKDHDDADLLLSKML | 823 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst11g00109 | 823 | Gene3D | - | 363 | 457 | IPR015943 | GO:0005515 | |
| Spst11g00109 | 823 | SMART | WD40_4 | 368 | 404 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | SMART | WD40_4 | 141 | 185 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | SMART | WD40_4 | 291 | 330 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | SMART | WD40_4 | 408 | 447 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | SMART | WD40_4 | 188 | 227 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | SMART | WD40_4 | 230 | 266 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | MobiDBLite | consensus disorder prediction | 1 | 84 | - | - | |
| Spst11g00109 | 823 | MobiDBLite | consensus disorder prediction | 556 | 636 | - | - | |
| Spst11g00109 | 823 | Pfam | WD domain, G-beta repeat | 238 | 266 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | Pfam | WD domain, G-beta repeat | 193 | 226 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | Pfam | WD domain, G-beta repeat | 415 | 446 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | Pfam | WD domain, G-beta repeat | 293 | 330 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | PANTHER | WD40 REPEAT PROTEIN | 11 | 278 | IPR045245 | GO:0031124 | |
| Spst11g00109 | 823 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 276 | 297 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 195 | 227 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 298 | 339 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 415 | 446 | - | - | |
| Spst11g00109 | 823 | MobiDBLite | consensus disorder prediction | 580 | 607 | - | - | |
| Spst11g00109 | 823 | Gene3D | - | 106 | 274 | IPR015943 | GO:0005515 | |
| Spst11g00109 | 823 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 415 | 446 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 298 | 332 | - | - | |
| Spst11g00109 | 823 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 153 | 185 | IPR001680 | GO:0005515 | |
| Spst11g00109 | 823 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 195 | 227 | - | - | |
| Spst11g00109 | 823 | Gene3D | - | 275 | 362 | IPR015943 | GO:0005515 | |
| Spst11g00109 | 823 | CDD | WD40 | 157 | 446 | - | - | |
| Spst11g00109 | 823 | MobiDBLite | consensus disorder prediction | 565 | 579 | - | - | |
| Spst11g00109 | 823 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Spst11g00109 | 823 | SUPERFAMILY | WD40 repeat-like | 147 | 446 | IPR036322 | GO:0005515 |