Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00106 ATGGCTTTAGAGACTCGGTTCCATGTTTTGGCTGTTGATGACAGTCTTATTGACAGAATGTTGATTGAGAGGCTCCTTAAAACCTCTTCCTTCAATGTTACTACGGTGGATTCTGCCACTAAGGCCTTGAAATTTCTTGGTTTGGTTGAAGATGAGTTGAGGACTTTTGAAACTTCTGTTGCATCAGAAATTCATCAGGATGTAGATGTTAACCTGATTATAACAGATTACTGTATGCCAGGAATGACTGGCTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCACTCAAAAACATACCAGTCGTGATTATGTCCTCAGAGAATGTACCATCAAGGATCAACAGATGCTTGGAAGAGGGAGCAGAAGAATTCTTTCTAAAACCAGTTCAACAGGCAGATGTAAATAAGCTGAAACCACATTTGATGAAATCAAGAAACAAGGGAGACCAAGATCAAGAGCAAGAACAAGACCAACACTTTCATAACAAAAGGAAGGACATGGAAGCAATTTCTTCCCCAAACAAAACCAGATTAAAATGCAGCAGTTAA 552 0.3877 MALETRFHVLAVDDSLIDRMLIERLLKTSSFNVTTVDSATKALKFLGLVEDELRTFETSVASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQADVNKLKPHLMKSRNKGDQDQEQEQDQHFHNKRKDMEAISSPNKTRLKCSS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00106 183 Gene3D - 8 180 - -
Spst11g00106 183 MobiDBLite consensus disorder prediction 142 183 - -
Spst11g00106 183 SUPERFAMILY CheY-like 6 144 IPR011006 -
Spst11g00106 183 ProSiteProfiles Response regulatory domain profile. 8 143 IPR001789 GO:0000160
Spst11g00106 183 MobiDBLite consensus disorder prediction 142 173 - -
Spst11g00106 183 CDD REC_typeA_ARR 9 138 - -
Spst11g00106 183 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 173 IPR045279 GO:0009736
Spst11g00106 183 Pfam Response regulator receiver domain 9 135 IPR001789 GO:0000160
Spst11g00106 183 SMART REC_2 7 142 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00106 Spst-Chr11 2407269 2408682 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst11g00106 Response_reg 2.3e-19 CL0304