Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00102 ATGGCTTCTTCTTCTTCTTTGGTTGTTGTTGGGCCTCTTAACCTCACTCCACAGAATGGTTACAAAGTGTGGGAAGATCCTTCTTTCATCAAGTGGAGGAAAAGGGATCCTCATGTCACCTTGCATTGCCATGATTCTCTAGAAGGATCTCTCAAATATTGGTATCAACGCAACAAAGTGGATTTTTTGGTTGCCCAGTCTGCTATTTGGAATGATGATGCTGTTCAGGGGTCTCTTGATTGTGCTACATTTTGGGTCAAAGATTTGCCTTTTGTTAAGTCCTTGTCTGGATATTGGAAGTTTTACATTGCTGACAGGCCCAACAATGTCCCTACTAACTTTTATGAAAGTGAGTTTCACGATTCAGAGTGGAAAAATTTGCCTGTTCCTTCGAATTGGCAGTTACATGGATTTGACCGTCCTATATATACCAACGTGGTGTATCCATTTCCACTAGATCCTCCTTTCATTCCTATGGAAAATCCTACTGGCTGTTACAGAACGTACTTCCACGTTCCTAAAGAATGGGAGGGTAGAAGAATTTTGTTGCATTTTGAAGCAGTTGATTCTGCCTTTTGTGCTTGGATAAATGGGCATCCTGTGGGATATAGCCAAGACAGCAGACTACCTGCAGAGTTTGAAATCACTGATTTTTGTCATCCATGTGGTTCAGATCTTAAAAATGTTCTGGCTGTTCAAGTGTATAGATGGAGTGATGGCTCTTACCTTGAAGACCAGGACCAGTGGCGGTTATCTGGTATCCACCGTGATGTCCTTCTTATGGCAAAGCCAGAGGTATTTATTACTGACTATTTTTTCAAATCAAATCTCGCTGAAGATTTTTCTTACGCAGATATACTGGTTGAAGTAAAAATAGATAGATTAAAAGAGACATCCAAGGATAATGTTCTCACGAACTACTCTATTGAAGCTACACTGTTTGATTCTGGAAGCTGGTATGCCGTTGATGGGAACCCTGATCTCCTTTCATCTAATGTGGCAGATATAAAGCTCCAACCATCAAGTACACCAGCACCAACATTAGGGTTTCATGGCTATGTGCTTACAGGGAAACTGCAATCACCAAAGCTTTGGTCTGCTGAGAAACCATACCTCTATACTCTAGTCGTTGTCCTGAAAGACCAATCTGGTCGTGTTGTTGACTGTGAATCATGTCCAGTAGGATTTAGAAAAGTATCTAAAGCCCACAAACAACTGCTTGTTAATGGACATGCTGTTGTAATAAGAGGTGTGAACAGGCATGAGCATCATCCTCAAGTGGGGAAGGCAAATATAGAATCCTGTATGATCAAGGATCTGGTCTTGATGAAGCAAAATAATATTAATGCTGTGCGAAACAGCCATTATCCCCAACATCCACGCTGGTATGAGCTATGTGATCTGTTTGGCATGTACATGATAGATGAAGCCAATATTGAGACGCATGGTTTTGACAATTCTAAACATTTCAAGCATCCTACTTTGAAACCAAGTTGGGCATCTGCAATGCTGGATCGGGTGATCGGCATGGTTGAGAGAGATAAAAATCACACATGCATTATTGCATGGTCTTTAGGGAATGAATCTGGATTCGGAACAAATCATTTTGCTTTAGCTGGTTGGATTCGAGGACGAGATTCATCGCGGGTATTACATTATGAAGGAGGTGGATCCAGGACTCCTTGCACTGATATTGTGTGTCCTATGTATATGCGCGTTTGGGACATGGTGAAAATAGCCCATGATCCAACTGAAACACGTCCTCTGATATTGTGCGAATATTCACATGCAATGGGAAACAGTAATGGAAATCTTCATTTATATTGGGAAGCAATTGACAACACATTTGGACTCCAAGGAGGCTTTATTTGGGATTGGGTTGATCAGGCCCTGGTGAAAGTTTATGAAGATGGTACAAAGCATTGGGCATATGGTGGTGAATTTGGGGATGTTCCCAATGACTTGAATTTCTGTTTGAATGGCCTCACATTTCCCGATCGAACTCCTCATCCTGCTTTACATGAGGTTAAGTACTTATATCAGCCAGTCAAGGTGGCTTTAAATGAAGGGACATTGGAGATAAAAAATACTAATTTTTTTCAAACTACGGAAGGATTGGAGTTCAGCTGGTATATTTCTGCAAATGGATATAACCTTGGATCTGGTATTCTGGACCTTGCCCCTATAAAGCCCCAGAGTAGTTATGCTGTTGATTGGCAATCAGGTCCATGGTATTCTCTATGGGCTTCATCATCAGAAGAAGAACTATTCTTGACCATATCGGCTAAACTTTTGGACTCTACACGCTGGGTTGAAGCTGGTCATATTGTCTCATCTGCTCAAGTTCAACTGCCTGCCAGGAGAAACATTATTCCTCATGCTATTGATATTAGTGGTGGCACTCTGGTTGCTGAAACACAAGGAGATACAATCATAGTCAAACAGCCAGATGTTTGGGATTTGACATTGAATACTAAAACAGGTTTAGTTGAAAGCTGGAAGGTTAAAGGAGTACATATTATGAAAAAGGGCATCCTCCCATGTTTCTGGCGAGCTCCTACTGATAATGATAAAGGAGGAATGGAAGCCAGTTATTTGTCCAGGTGGAAAGCTGCTGGAATGGACTGCCTCCACTTTATTACTGAGAGCTGTTCTGTGCAAAATATTACAGAGAGCACGGTTAGAATATTGGTGGTTTTTCTTGGTGTTACAAAGGGTGAGGAGGAATCTCTCTCTAACCAAGACAAGTCAAAGGTTTTATATACAACAGAAATGACATATACAATTTATGCTTCTGGGGATGTTATTTTAGAATACAATGTGCAGCCAAACCCTGATCTCCCTCCTTTACCACGCGTCGGAATTGAGTTAAATGTGGAAAAATCACTGGATCTAGTAACTTGGTATGGAAAAGGGCCATTTGAGTGTTATCCGGATCGAAAAGCTGCAGCCCAAGTTGCAGTCTATGAATATACTGTTGGTGAGTTGCATGTTCCTTATATTGTTCCTGGGGAATCTTCTGGCAGGGCAGATGTTAGGTGGGTAACATTCAGAAACAAAAATGGTTTTGGAATATATGCTTCTAAGTATGGTAGCTCTCCACCAGTGCAAATGAGTGCAAGCTACTATAGCACCTCAGAACTTGACCGTGCCACACACAATGAAGAGCTCATTGAAGGAGATAGCATTGAGGTTCATCTGGATCACAAGCACATGGGATTAGGTGGAGATGATAGTTGGTCACCATGTGTCCACACTCAGTATTTGATTCCTCCTGTGTCATACTCATTCTCTGTCAGGTTATGTCCTGTAACTCCAGCCACTTCTGGTTATGACATCTACAAATCCCAACTTCAAAACTCTTGA 3366 0.4147 MASSSSLVVVGPLNLTPQNGYKVWEDPSFIKWRKRDPHVTLHCHDSLEGSLKYWYQRNKVDFLVAQSAIWNDDAVQGSLDCATFWVKDLPFVKSLSGYWKFYIADRPNNVPTNFYESEFHDSEWKNLPVPSNWQLHGFDRPIYTNVVYPFPLDPPFIPMENPTGCYRTYFHVPKEWEGRRILLHFEAVDSAFCAWINGHPVGYSQDSRLPAEFEITDFCHPCGSDLKNVLAVQVYRWSDGSYLEDQDQWRLSGIHRDVLLMAKPEVFITDYFFKSNLAEDFSYADILVEVKIDRLKETSKDNVLTNYSIEATLFDSGSWYAVDGNPDLLSSNVADIKLQPSSTPAPTLGFHGYVLTGKLQSPKLWSAEKPYLYTLVVVLKDQSGRVVDCESCPVGFRKVSKAHKQLLVNGHAVVIRGVNRHEHHPQVGKANIESCMIKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDNSKHFKHPTLKPSWASAMLDRVIGMVERDKNHTCIIAWSLGNESGFGTNHFALAGWIRGRDSSRVLHYEGGGSRTPCTDIVCPMYMRVWDMVKIAHDPTETRPLILCEYSHAMGNSNGNLHLYWEAIDNTFGLQGGFIWDWVDQALVKVYEDGTKHWAYGGEFGDVPNDLNFCLNGLTFPDRTPHPALHEVKYLYQPVKVALNEGTLEIKNTNFFQTTEGLEFSWYISANGYNLGSGILDLAPIKPQSSYAVDWQSGPWYSLWASSSEEELFLTISAKLLDSTRWVEAGHIVSSAQVQLPARRNIIPHAIDISGGTLVAETQGDTIIVKQPDVWDLTLNTKTGLVESWKVKGVHIMKKGILPCFWRAPTDNDKGGMEASYLSRWKAAGMDCLHFITESCSVQNITESTVRILVVFLGVTKGEEESLSNQDKSKVLYTTEMTYTIYASGDVILEYNVQPNPDLPPLPRVGIELNVEKSLDLVTWYGKGPFECYPDRKAAAQVAVYEYTVGELHVPYIVPGESSGRADVRWVTFRNKNGFGIYASKYGSSPPVQMSASYYSTSELDRATHNEELIEGDSIEVHLDHKHMGLGGDDSWSPCVHTQYLIPPVSYSFSVRLCPVTPATSGYDIYKSQLQNS 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00102 1121 FunFam Beta-galactosidase 398 680 - -
Spst11g00102 1121 ProSitePatterns Glycosyl hydrolases family 2 signature 1. 449 474 IPR023230 -
Spst11g00102 1121 SUPERFAMILY beta-Galactosidase/glucuronidase domain 677 787 IPR036156 -
Spst11g00102 1121 Pfam Glycosyl hydrolases family 2 266 397 IPR006102 GO:0004553|GO:0005975
Spst11g00102 1121 PRINTS Glycosyl hydrolase family 2 signature 188 203 IPR006101 GO:0004553|GO:0005975
Spst11g00102 1121 PRINTS Glycosyl hydrolase family 2 signature 408 422 IPR006101 GO:0004553|GO:0005975
Spst11g00102 1121 PRINTS Glycosyl hydrolase family 2 signature 514 529 IPR006101 GO:0004553|GO:0005975
Spst11g00102 1121 PRINTS Glycosyl hydrolase family 2 signature 439 457 IPR006101 GO:0004553|GO:0005975
Spst11g00102 1121 PRINTS Glycosyl hydrolase family 2 signature 587 602 IPR006101 GO:0004553|GO:0005975
Spst11g00102 1121 FunFam Glycoside hydrolase family 2 protein 801 1103 - -
Spst11g00102 1121 FunFam Glycoside hydrolase family 2 protein 266 397 - -
Spst11g00102 1121 PANTHER BETA-GALACTOSIDASE 22 1117 - -
Spst11g00102 1121 Pfam Beta-galactosidase, domain 4 692 785 IPR032312 -
Spst11g00102 1121 Gene3D Immunoglobulins 265 397 IPR013783 -
Spst11g00102 1121 SMART Bgal_small_N_2 817 1102 IPR004199 GO:0004565|GO:0005975|GO:0009341
Spst11g00102 1121 Pfam Glycosyl hydrolases family 2, TIM barrel domain 403 684 IPR006103 GO:0004553|GO:0005975
Spst11g00102 1121 Pfam Beta galactosidase small chain 819 1101 IPR004199 GO:0004565|GO:0005975|GO:0009341
Spst11g00102 1121 SUPERFAMILY (Trans)glycosidases 402 681 IPR017853 -
Spst11g00102 1121 SUPERFAMILY beta-Galactosidase/glucuronidase domain 266 397 IPR036156 -
Spst11g00102 1121 Pfam Glycosyl hydrolases family 2, sugar binding domain 93 264 IPR006104 GO:0004553|GO:0005975
Spst11g00102 1121 Gene3D Immunoglobulins 681 789 IPR013783 -
Spst11g00102 1121 Gene3D - 801 1103 IPR014718 GO:0030246
Spst11g00102 1121 SUPERFAMILY Galactose-binding domain-like 92 264 IPR008979 -
Spst11g00102 1121 Gene3D - 14 264 - -
Spst11g00102 1121 Gene3D Glycosidases 399 680 - -
Spst11g00102 1121 SUPERFAMILY Galactose mutarotase-like 801 1104 IPR011013 GO:0003824|GO:0005975|GO:0030246