Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00089 ATGTCTGAATTGGTGGCGCGTACGGGGCGGCATCAACAGCGCTACGAGAACGGTTATCGTCTTGTTGCTGGGTGTGTACCATTTAGATATAAAAGTTCTAATGTCGACTCCAGTTCCGCGAAGATTGTTGAAGTGCTTATGATTAATTCACCAAGTGGACCTGGTCTTTTGTTTCCAAAGGGAGGTTGGGAGAATGACGAAACTGTTGAGGAGGCAGCTGCAAGGGAAGCTGTAGAAGAAGCAGGAGTTCGAGGAGACCTAATGGATTTTCTTGGATATTATGAATTTAGGAGTAAGACCCATCAAGATGAGTTTAGTCCAGAAGGTTTATGTAGAGCAGCAATGTTTGCCTTGTTTGTCAAGGAGGAACTAGAGTTGTGGCCTGAGCAAAGCACCAGAAATCGGAGTTGGCTAGCTTTATCGGAGGCACTTAAAAGCCTCCGGCATGCATGGATGAGGGACGCCCTGGAATGCTTCTGTAAATGGCACGAGGATAAGTTGGTGAATGGGACGAAAGGATGA 522 0.4655 MSELVARTGRHQQRYENGYRLVAGCVPFRYKSSNVDSSSAKIVEVLMINSPSGPGLLFPKGGWENDETVEEAAAREAVEEAGVRGDLMDFLGYYEFRSKTHQDEFSPEGLCRAAMFALFVKEELELWPEQSTRNRSWLALSEALKSLRHAWMRDALECFCKWHEDKLVNGTKG 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00089 173 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Spst11g00089 173 Pfam NUDIX domain 45 156 IPR000086 -
Spst11g00089 173 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 161 - -
Spst11g00089 173 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 162 - -
Spst11g00089 173 FunFam Nudix hydrolase 16, mitochondrial 5 159 - -
Spst11g00089 173 SUPERFAMILY Nudix 10 163 IPR015797 -
Spst11g00089 173 ProSiteProfiles Nudix hydrolase domain profile. 18 160 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00089 Spst-Chr11 1859989 1863707 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00089 11 1859989 1863707 Spst11g00089 11 1859989 1863707 ECH