Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00068 ATGATGGCCCTTGATAATTCAGAAAATATGCAAATAAACTGTGAGGCATCTTTAAAATGCCTCCAGGGCAAGGTATTTCCTTGCAATTTTCAGAGTAATGGGAGTTCTATGGAAGGTTTTACAGAGCTTAAAAATGAGCCTGGTTCTCACCCAGCTGGGGATGTTACTGAGCCTAACTGCCATTTAGGCAGTGAGTTTCTTGAGCCTTCCAATGAATTTCACAGCAAACCTACTTATCATCAAAACTACAGTTCCTGGACACCCTGCCATTTTAATGCTCACAAGGTGCAGCCTTGCCCAATGAATGCTTTTGAGAGCCATTTATATCCTTATCCTGTTGAGAACCAGCTTCAGTATGTTCCAATTAACATGATTGCTCAGGGTTTCCCGCGTGAGCAATATCAAGAATTTCAGTACTTTGTGGTGATAGACTTTGAGGCTACCTGTGACAAGGAGAAAAATCCCCACCCTCAAGAAATAATTGAGTTTCCATCTGTTATAGTGAGTAGCATCACTGGCCAGCTGGAAGCGTGTTTTCAAACATATGTGAGGCCCACCTGCAATCAGCTTCTGACTGACTTCTGCAAGGATCTGACTGGTATCCAGCAAATTCAGGTGGACAGAGGTGTTACATTGAGTGAGGCTCTACTTAGGCATGATAAGTGGCTTGAGAAGAAGGGAATAAAGAATTCCAACTTTGCTGTGGTCACATGGTCTAACTGGGATTGTCGGGTGATGCTTGAATCTGAGTGTCGATTCAAGAAAATTCGGAAGCCTCCTTATTTTAACCGCTGGATCAACTTAAGGATTCCTTTCCGTGAGGTATTTGGTGCTGTCAGGTGCAATCTAAAGGAAGCTGTTGAGATAGCCGGCCTGGCCTGGCAGGGTCGTGCACATTGTGGCCTCGATGATGCCAAAAATACTGCTCGCCTGCTGGCACTGCTCTTGCACCGGGGATTTAGATTTTCCATTACCAATTCCATAATGTGGCAGCCAGCTGATCGATCGCTGGTGTGGAAACAGTCTCCAGAACAACCAATTATTTTCCCCCATTTCCCCTACAAAGCAAAGGATATCACCACCCCCATGGTTCAGTATAACCCTTTCTGCCACTGTGGGGTGAAAAGCAGCAGGTGCATGGTGAGGAAGCCGGGTCCCAAGCATGGGAGCCTTTTCTTTGGATGTGGAAATTGGACTGCAACTAGAGGTGCTCGCTGCAATTACTTTGAATGGGCTTCTAACTGA 1245 0.4554 MMALDNSENMQINCEASLKCLQGKVFPCNFQSNGSSMEGFTELKNEPGSHPAGDVTEPNCHLGSEFLEPSNEFHSKPTYHQNYSSWTPCHFNAHKVQPCPMNAFESHLYPYPVENQLQYVPINMIAQGFPREQYQEFQYFVVIDFEATCDKEKNPHPQEIIEFPSVIVSSITGQLEACFQTYVRPTCNQLLTDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNSNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLRIPFREVFGAVRCNLKEAVEIAGLAWQGRAHCGLDDAKNTARLLALLLHRGFRFSITNSIMWQPADRSLVWKQSPEQPIIFPHFPYKAKDITTPMVQYNPFCHCGVKSSRCMVRKPGPKHGSLFFGCGNWTATRGARCNYFEWASN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00068 414 SMART exoiiiendus 139 321 IPR013520 -
Spst11g00068 414 FunFam Exonuclease domain-containing protein 1 131 352 - -
Spst11g00068 414 Gene3D - 130 347 IPR036397 GO:0003676
Spst11g00068 414 PANTHER 3'-5' EXONUCLEASE ERI1-RELATED 104 336 - -
Spst11g00068 414 SUPERFAMILY Ribonuclease H-like 137 326 IPR012337 -
Spst11g00068 414 Pfam Exonuclease 141 312 IPR013520 -
Spst11g00068 414 Pfam GRF zinc finger 368 413 IPR010666 GO:0008270
Spst11g00068 414 ProSiteProfiles Zinc finger GRF-type profile. 370 414 IPR010666 GO:0008270
Spst11g00068 414 CDD ERI-1_3'hExo_like 140 310 IPR047201 GO:0000175
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00068 Spst-Chr11 1270851 1276166 Dispersed