Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00058 ATGGCTTTCAGGCAGAGAACACCAACTTTTCGTCCACAACTCACGATTCGTCGCGTGTACGAGACTTTCCAGCCACGATCAGAGATAAAAGATCTCCCAGAAGCTTACCTTCTACGTGTTTATCTTCCTGGTTTTCCTAGGGACAGTGTAAAGGTATCTGTGGCCTCTACACGAGCGGTGAGGATTACAGGAGAAAGACAAATCCAAGGCACGAGATGGTATCGATTTGACCAATCATATCCCATTCCTGATTATTGTGAGCCAGGGGCACTGCAGGCCAAGTTTGAAACCCCAGTTCTCACCCTTACTATGCCGAAGAAGGCCACTCCACAAGCTCCTCCGAAACAAGAAGAAGTGGAAACATCTCAAGAGCAAGGTGTAGTAGCTGAACCAAAACCTGACGAAAAACAACTAGATACTACCACCACACCACAACCTACAACTACTAAAGTAGAAGAACCAATTCAAAGCAAGAAAACTGTTTCCTCACAACCTAAAACTACTCTTGAAGATACACCATCTCAGACCCCTTCAGAACCAATAAAGGATCAAAAGGGTCAAGTGGAAGCTGTAGAAAGAGTCGGTCCTTCTGGTATGGGTGAGAAGGAGTTTGAGGCAAAACCAACACCAGCAAGGCGAGCCACAATGCAAAGAGATGAAAAGATTCAGAAGGGCCAAGAAGAGGTTGAGTCAAAACCAACACCGACAGTGCAAACCGAAATGGAAACAGATGAAAAGCCTCAAAAGGGTCAAGATCAGGAATTTGAACCAAGGCCAACACCAGCAATGCTAACCAAAGTGGAAACGGCTGAAAAGTACCAGAAGGTTCAAGAGGAATTTGAACCAAGACCGACACCAGCAATGCTAAGCAAAGTCAAAACAGCTGAAAAGTCCCAGAAGGGTCACGAGGATTTTGAACCAAAACCAACTATGCTAAAAAAGGCCAAAACAGCTGAAAAGCCTCAAATGGGTGAAGAGAAATTTGAACCTAAAGCAAGACCAACAATGGCACCAAACATCAAAACAGTTGAGAAACCTCCAAAGGGACAAGAGCAAGATGAGCCAAAACCTGCAATAACAAATGTTACCAGAAAGCCAACAGTTAAAGAGCAATTGGAGGAAAAGAAGACAGAGGAAGCACGTGATGAAGATTCTGAAGAAACAAGTGATGAAGATTCTGAAAAAACAAGTTATGAAGATGCAGAGGAAACAAGTGATGAAGATGAAGATAAGAAAAGGATCACAAAGAAGGAAGTTAAAGAGGAACCTTCTGAGTCAAGAAAGTTCATGAAAGAAAAGGAGCAGGCTGATTTTGGAGAGAAAGAAACCGAGGCAGAAAAATTGTTAGCCAAGGAAGCAGAAATTTCTGCTCCAAAAATTCAGAAGACAAAGGAAAAGCAATCAAACAACAGAACTTCTCTAAAAATGGAACTGAAGAGTGAAAATAATGCAATGGAAAGGGTTGGTTCTGTCTCCCAAGTTTTCACAAAATTTTCAGAAGGGATATGGAATGAAGAAGAGAAAAAATTAGCAGCAAATATTGGTGCTGCTGTTCTTGTCATTGCTGCATTGGGATATTATGTCTCTTATAAGTTTGCCTCTTGA 1605 0.4212 MAFRQRTPTFRPQLTIRRVYETFQPRSEIKDLPEAYLLRVYLPGFPRDSVKVSVASTRAVRITGERQIQGTRWYRFDQSYPIPDYCEPGALQAKFETPVLTLTMPKKATPQAPPKQEEVETSQEQGVVAEPKPDEKQLDTTTTPQPTTTKVEEPIQSKKTVSSQPKTTLEDTPSQTPSEPIKDQKGQVEAVERVGPSGMGEKEFEAKPTPARRATMQRDEKIQKGQEEVESKPTPTVQTEMETDEKPQKGQDQEFEPRPTPAMLTKVETAEKYQKVQEEFEPRPTPAMLSKVKTAEKSQKGHEDFEPKPTMLKKAKTAEKPQMGEEKFEPKARPTMAPNIKTVEKPPKGQEQDEPKPAITNVTRKPTVKEQLEEKKTEEARDEDSEETSDEDSEKTSYEDAEETSDEDEDKKRITKKEVKEEPSESRKFMKEKEQADFGEKETEAEKLLAKEAEISAPKIQKTKEKQSNNRTSLKMELKSENNAMERVGSVSQVFTKFSEGIWNEEEKKLAANIGAAVLVIAALGYYVSYKFAS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00058 534 MobiDBLite consensus disorder prediction 196 228 - -
Spst11g00058 534 MobiDBLite consensus disorder prediction 295 332 - -
Spst11g00058 534 MobiDBLite consensus disorder prediction 138 182 - -
Spst11g00058 534 Coils Coil 398 418 - -
Spst11g00058 534 MobiDBLite consensus disorder prediction 407 472 - -
Spst11g00058 534 MobiDBLite consensus disorder prediction 383 406 - -
Spst11g00058 534 Pfam Hsp20/alpha crystallin family 29 116 IPR002068 -
Spst11g00058 534 SUPERFAMILY HSP20-like chaperones 9 112 IPR008978 -
Spst11g00058 534 MobiDBLite consensus disorder prediction 367 382 - -
Spst11g00058 534 Coils Coil 464 484 - -
Spst11g00058 534 CDD ACD_sHsps-like 28 106 - -
Spst11g00058 534 Gene3D - 4 111 IPR008978 -
Spst11g00058 534 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 18 122 IPR002068 -
Spst11g00058 534 MobiDBLite consensus disorder prediction 106 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00058 Spst-Chr11 1000734 1003346 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01962 5 55140008 55141060 Spst11g00058 11 1000734 1003346 PCT