Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00051 ATGGCTGCCACCACCACTCTCTCCTTCAACTTCCCATATTCAACGCTCTCTTCGGAATCTAAACTTTCGCTCTCTTCACCTTCCCAATTCAAACCCTACACTGTTGCTTCCCGCCAGAATGTCTGCATCTCCACCACCGCCACGCTCTCTGTCTCCGCTTTCAGAAACCCAACCTCCCCAATGTTTCTCGCAACGGCTTCTCGGAACGCCGAGCCCATGCTCCCTCCTTTCAACGTTTTGATTACTGGCTCAACCAAAGGAATAGGGTATGCGTTGGCGAAAGAGTTTTTAAAAGCTGGTGACAACGTCCTGATTTGCTCAAGATCAGATGAAAGGGTAGAGAGTGCTGTCCAGAGCTTGAGAGTAGAATTTGGGGAGCAGTATGTGTGGGGAACTAAATGCGATGTGAGAATTGCAGAGGATGTGAAGAATTTAGTTTCATTTGCTCAAGAAAAACTGAAATACATTGATATATGGATCAACAATGCTGGATCAAATGCATATTGCTATAAGCCACTTGTTGAGGCATCAGATGAGGATCTTATTGAGGTGGTTACAACAAATACCCTTGGCTTGATGATATGTTGTCGAGAGGCAATCAAGATGATGGTGAACCAGCCTCGTGGAGGTCATATTTTCAATATTGATGGAGCAGGTTCAGATGGCAGACCAACTCCACGGTTTGCTGCATATGGAGCAACAAAGAGAAGTGTGGTGCACTTAACAAAGTCATTACAGGCAGAATTGCAGATGCAAGATGTTAAAAATGTCGTAGTACATAATCTTTCGCCAGGAATGGTTACAACGGATCTTCTCATGTCTGGTGTTAATACAAAGCAGGCAAAGTTTTTCATTAATGTCTTGGCAGAACCTGCTGAAGTGGTTGCAGAATACTTGGTTCCAAACATTAGATCCATCCCTGCAAACGGATCAAAGAAACCAACATACATTCGATTCCTCACCGGTTTGAAAGCCTACTCTCAGATATTTTCAAGATTGGCATTCGGGGCAAGAAGGAACCGATACATTCTTGAGGATTGA 1041 0.4419 MAATTTLSFNFPYSTLSSESKLSLSSPSQFKPYTVASRQNVCISTTATLSVSAFRNPTSPMFLATASRNAEPMLPPFNVLITGSTKGIGYALAKEFLKAGDNVLICSRSDERVESAVQSLRVEFGEQYVWGTKCDVRIAEDVKNLVSFAQEKLKYIDIWINNAGSNAYCYKPLVEASDEDLIEVVTTNTLGLMICCREAIKMMVNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGVNTKQAKFFINVLAEPAEVVAEYLVPNIRSIPANGSKKPTYIRFLTGLKAYSQIFSRLAFGARRNRYILED 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00051 346 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 65 343 - -
Spst11g00051 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 78 297 IPR036291 -
Spst11g00051 346 Pfam short chain dehydrogenase 79 274 IPR002347 -
Spst11g00051 346 PRINTS Glucose/ribitol dehydrogenase family signature 204 220 IPR002347 -
Spst11g00051 346 PRINTS Glucose/ribitol dehydrogenase family signature 78 95 IPR002347 -
Spst11g00051 346 PRINTS Glucose/ribitol dehydrogenase family signature 154 165 IPR002347 -
Spst11g00051 346 PRINTS Glucose/ribitol dehydrogenase family signature 231 250 IPR002347 -
Spst11g00051 346 PRINTS Glucose/ribitol dehydrogenase family signature 255 272 IPR002347 -
Spst11g00051 346 CDD SDR_c 79 300 - -
Spst11g00051 346 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 165 IPR002347 -
Spst11g00051 346 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 210 218 IPR002347 -
Spst11g00051 346 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 231 250 IPR002347 -
Spst11g00051 346 Gene3D - 78 302 - -
Spst11g00051 346 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 218 246 IPR020904 GO:0016491
Spst11g00051 346 FunFam Chlorophyll(Ide) b reductase NOL, chloroplastic 74 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00051 Spst-Chr11 914561 928888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00051 79 271 Acyl Lipid Metabolism Gene Families AT1G24360 30.808 6.07e-16 75.9