Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00034 ATGGCACAACCCACTATTGTGATTTTATTTGCAGGCACACACGTGGGGTTGATGGACAACGAATTTGAGGATAAACAAGAAGAAACAGTTTCAGATATGATGGCAAGCAATCAGCAGAGGAAAAAGCAGTCGTTTCTGTGGAAAGTTTTGGCGATGAGGGAGAGAAATGCAAGGACAATGGAGAGAGGTTCAAATTATTCGCTTGATACACTTTCGGATCCATCCAGTGAAAATCTAGGTTCGGAACCTTCTATGGCTTCTACTGAAGCAGGTCAAAATCTCAGAGTTTTTGCAGCAACATGGAACGTAGGAGGGCAATGCCCCACTGTGAACCTTGATCTGGGTGATTTTCTTCAGGTTCGAAATGAACCAGATATGTATGTTTTGGGCTTTCAGGAGATTGTCCCTTTAAATGCTGGAAATGTGCTGGTATTAGAGGATAATGAGCCTGCTGCAAAATGGCTTGCTTTAATCAACCAATCACTCAATGGTCCTTCAGATTTGACATCTAACGGACTAAAATCAACTGCATCTTTTGGCGGACCATTGTTCTTCCAAAAGCCTTCTTTGAAGAAGATTAAGAAAACTTTCAAGAAAATAAATGGAAAGAGGCTAAAAAGTTGTAACTGTGTTTTTGAAATGGAAAGGAAGGCTGCTAAGGATTTTTGTTTCCGCTGTCAAGAATCAAACTTCAATTCTGATGATTCTTCAACTGAAGAGGAGGATGAGAATTTCCCAATTCCTGTTGCCTTGGCTACTAATCAGATGAAATATAGTCTTGTTACATGTAAGCAAATGGTTGGAATTTTTGTGAGTGTCTGGATGAAGAGGGAACTTGTTCAGTACATAGGCCATTTAAGAATATGTTGCACTAGTCGCGGGATCATGGGTTGCCTTGGGAACAAGGGGTGTATATCAGTGAGCATGTCTTTTTATCAGACAAGTTTTTGCTTTATCTGTAGCCATTTGGCATCTGGAGAGAAAGAGGGTGACGAGCTTCGCAGGAATCTTGATGTCATAGAGATTTTGAAGAATACTCAGTTTCCAAGGATTTGCAAGACACCCCATAGTAGGATGCCTGACAGAATCTTAGATCACGACCGAATCATATGGTTTGGGGACTTGAATTACAGAATTTCTTTGAGCCATGATGATGCAAAAAGGCTTGTGGAAAAGAAGGACTGGCCTGCTCTTTTTAACAAGGATCAGCTTAAAATGGAAAGGGAAGCAGGTCGTGTGTTCAAGGGGTGGAAAGAGGGAAAAATCTACTTTGCACCTACTTACAAATATGCGTTCAACTCAGACACTTACTATGTTGAAGGTGTAAAAGTTTCAAAGAACAAAAGGAGAACTCCAGCTTGGTGCGACAGAATCTTGTGGCATGGAAGGGGAATACATCAACTTTCATACGTCCGCAAGGAATTTAAATTCTCGGATCATCGACCTGTTTGTGCGACATTTAATGTAGAAGTTGAGGTCATGTTCAGGGGACAGAAGAAGAAAGTTTCAACTTACAACTTTCAGAACATTGATGATCTTGTATCCACAAGAAGTCCATATTATTCTTGA 1569 0.406 MAQPTIVILFAGTHVGLMDNEFEDKQEETVSDMMASNQQRKKQSFLWKVLAMRERNARTMERGSNYSLDTLSDPSSENLGSEPSMASTEAGQNLRVFAATWNVGGQCPTVNLDLGDFLQVRNEPDMYVLGFQEIVPLNAGNVLVLEDNEPAAKWLALINQSLNGPSDLTSNGLKSTASFGGPLFFQKPSLKKIKKTFKKINGKRLKSCNCVFEMERKAAKDFCFRCQESNFNSDDSSTEEEDENFPIPVALATNQMKYSLVTCKQMVGIFVSVWMKRELVQYIGHLRICCTSRGIMGCLGNKGCISVSMSFYQTSFCFICSHLASGEKEGDELRRNLDVIEILKNTQFPRICKTPHSRMPDRILDHDRIIWFGDLNYRISLSHDDAKRLVEKKDWPALFNKDQLKMEREAGRVFKGWKEGKIYFAPTYKYAFNSDTYYVEGVKVSKNKRRTPAWCDRILWHGRGIHQLSYVRKEFKFSDHRPVCATFNVEVEVMFRGQKKKVSTYNFQNIDDLVSTRSPYYS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00034 522 SMART i5p_5 92 495 IPR000300 GO:0016791|GO:0046856
Spst11g00034 522 MobiDBLite consensus disorder prediction 61 87 - -
Spst11g00034 522 Gene3D Endonuclease/exonuclease/phosphatase 81 520 IPR036691 -
Spst11g00034 522 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 54 504 IPR045849 GO:0004445
Spst11g00034 522 SUPERFAMILY DNase I-like 89 512 IPR036691 -
Spst11g00034 522 Pfam Endonuclease/Exonuclease/phosphatase family 99 480 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00034 Spst-Chr11 668107 673312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00034 264 501 Acyl Lipid Metabolism Gene Families AT2G43900 27.437 3.82e-28 117