Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00030 ATGTCTCAGAAGTACTTTGAAGCAAAAGATAGTGATGTTATTGTTGCTAGTTTTCCAAAATCAGGGACAACATGGTTGAAAGCCATTACTTTTGCCATTGTCAATCGTCAAAGCTTTTCGTCCATAGAGAACCATCCATTACTTGAGACCAACCCTCATGAACTTGTGCCTGCTGTTGAATTTATGTATCGTGGTGATGTAGATTGCCCAACCACTGAGCCAAGAGTTTTTGGAACTCACACTCCGTTCCCCTCCTTGCCCAAGTCCATCATGGACTCTAACTGTAAGATAATTTATATTTGTAGGAACCCTTTTGACACTTTTGTTTCAGCATGGACTTACTTTAATAAAATTAAGCTAGAGCCTTTATCTGCATTACAGAAAGAGGAAGCTTTTGAAATGTTTTGCAATGGGGTAATCGAGTTTGGTCCATGGTGGAGCCATATGTTAGGTTACTGGAAGCAGAGCAAAGTTACACCAGATAAAGTTTTGTTTTTGAAGTATGAAGATCTTAAAGAGGATGCCAATTTCCATGTGAAAAGAGTTGCAGAGTTTTTGGGTTTTCCTTTCACTGAGGAGGAAGAAAGTAACAGTGTGATTGAAAACATAGTGAAACTGTGTAGCTTTTCGAACATGAAGGATTTGGAGGTGAATAAATCTGGAGTAGTGTACCGATTTCTTGAGAAAAAGTACTTCTTTCGAAAAGCAGAAATAGGAGATTGGCTTGAACTAGCTATAGCATTAACCATGTCTCCCTTCAAATCTTACGGCAAAGTTGATGAATCAGAGCAAGTCATGCTCGAAGTTCGCCGCAGAACCCGAAAGAGAATCACCATCATAGCCTTATCCACAATAGTTCTCATTGGAGTTGTGTGTGCTGCAGTTTTTGGAACAGTTGCTCATAACAATAACAACAACAACAACTCGAATGATGGTGAAAATGCTTCTTCTATTTCCAACTCAGTGAAGGATGTTTGTGATGTGACACTCTACAAGGACGCGTGCTATAGCAGCCTTGGTTCTCTTGCGGAGTCGGGTCAGGTTCGACCTGAGGACTTATTCTTGTTGTCTATTAAAGTGGCCTTAGGTGAGGCTTCTAAGGCTGCTGAGTATTTCTCTCAGAAGGTAGGGTTCAGTGGCTTCAATGTTGATAACAGGACCATGGAAGGTTTTAAGAACTGCAATGATCTTCTGGGTCTTGCGATTGATCATCTGAATAGCTCTTTGGCTTCTGGTGGGAAGTTTTCCTTGCTTGATACGCTGGAGGATCTCAGAACATGGTTGAGTGCTGCAG 1294 0.4111 MSQKYFEAKDSDVIVASFPKSGTTWLKAITFAIVNRQSFSSIENHPLLETNPHELVPAVEFMYRGDVDCPTTEPRVFGTHTPFPSLPKSIMDSNCKIIYICRNPFDTFVSAWTYFNKIKLEPLSALQKEEAFEMFCNGVIEFGPWWSHMLGYWKQSKVTPDKVLFLKYEDLKEDANFHVKRVAEFLGFPFTEEEESNSVIENIVKLCSFSNMKDLEVNKSGVVYRFLEKKYFFRKAEIGDWLELAIALTMSPFKSYGKVDESEQVMLEVRRRTRKRITIIALSTIVLIGVVCAAVFGTVAHNNNNNNNSNDGENASSISNSVKDVCDVTLYKDACYSSLGSLAESGQVRPEDLFLLSIKVALGEASKAAEYFSQKVGFSGFNVDNRTMEGFKNCNDLLGLAIDHLNSSLASGGKFSLLDTLEDLRTWLSAA 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00030 431 SMART PMEI_2 317 431 IPR006501 GO:0004857
Spst11g00030 431 Gene3D - 1 245 IPR027417 -
Spst11g00030 431 PANTHER SULFOTRANSFERASE SULT 6 242 - -
Spst11g00030 431 Pfam Plant invertase/pectin methylesterase inhibitor 321 431 IPR006501 GO:0004857
Spst11g00030 431 NCBIfam pectinesterase inhibitor domain 319 431 IPR006501 GO:0004857
Spst11g00030 431 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 320 431 IPR035513 -
Spst11g00030 431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 242 IPR027417 -
Spst11g00030 431 Gene3D Invertase/pectin methylesterase inhibitor family protein 318 431 IPR035513 -
Spst11g00030 431 CDD PMEI-like_3 325 431 - -
Spst11g00030 431 Pfam Sulfotransferase domain 10 247 IPR000863 GO:0008146
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00030 Spst-Chr11 595489 598005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00030 256 431 Carbohydrate Esterase AT3G10710 46.067 1.00e-39 148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00030 11 595489 598005 Spst11g00030 11 595489 598005 ECH