Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00027 ATGGAAGAGGAGAATTTCAAACAACCATTGTTGGAGAATAAGTACTACGAGGGGTGTCCCGGTTGTCAAGTGGATCAAGCCAAAGAGTCGAGTAAAGGACAGGGTGTACCCGTCAGAAATCTTTTCATCATATGGACTGTGGTTTTGTGTGCTGCTCTGCCTATATCATCCCTCTTTCCATTTCTTTATTTCATGGTAAGGGATTTTCATATTGCAAAAACAGAAGCTGATATTAGTTCTTATGCTGGTTATGTTGGTTCTGCTTTCATGCTTGGCAGATGTTTGACATCTGCACTGTGGGGATTTGTAGCTGATATCTATGGTCGAAAGCCAGTTATTGTTATAGGGATTATTGCAGTTGTCATTTTCAACACACTATTTGGTCTTAGCACAAGCTTTTGGATGGCTGTGATCACGAGATTTCTTCAGGGAAGTTTGAATGGTTTGCTAGGACCAGTGAAGGCCTATGCTTCTGAACTTGTTCGAGAAGAACACCAAGCTCTAGCAATTTCCACAGTAACTGCAGCTTGGGGCATAGGTTTGATCATTGGTCCAGCAGTGGGAGGCTATTTGTCTCAGCCTGTTGAGAAGTACCCAAATATATTTCCAGAGGATTCCTTTTGGAATAAGTTTCCTTACTTCTTACCCAACTTGGTAATATCAGCAGTTGCATTTGTAGTAGCTATTGGCTGTATCTGGATTCCGGAAACACTTCACAACCATAAATGTAGCAATGAATCCATAGACAATGCCGAAGCTCTAGAGAATGGAGGTAGTGTGGAAGGCAAAGACAAGATAATCCAAAAGAATGAAAACCTCCTCCTGAATTGGCCCTTAATGTCCTCTGTCATTGTTTATTGTGTTTTTGCTCTTCATGATATTGCATATCAAGAGGTTTTCTCGTTATGGGCTGTGAGTCCTGAAAGACTGGGCGGTTTGAGCTTTACAACTGATGATGTTGGTAATGTTCTTTCAATATCAGGTCTTGCACTTATCATTTACCAGCTTACCGTATACCCTTATGTGGAAAAGGCTACTGGACCTATTCGTATTGCCCGTATCTCAGGGATGGTAGCCATACCACTTTTGCAAAGTTACCCGTTCATTGCACTGTTGTCAGGCATAGCTCTATACACACTGTTAACTATTGCTTCAATTTTGAAGAATATTCTGTCTGTGACCATTAATACTGGTTTGTTCCTTCTACAAAACCGAGCAGTGGAACAACACCAAAGGGGGGCAGCTAATGGCATTTCTATGACAGGCATGTCTCTATTCAAAGCTATTGGCCCTGCTACAGTTGGTGCATTATTAACTTGGTCACAGAAGCGGATGGATGCTTCGTTCCTCCCAGGAACCCATTTGGTGTTCTTTGTCCTGAACATAGTTGAAGCAGTTGGATTGCTAATGATGTTCAAACCATTCCTTGTTGAAAAGAAGAAAACACACTCAGATCAGTTACACTGA 1467 0.4165 MEEENFKQPLLENKYYEGCPGCQVDQAKESSKGQGVPVRNLFIIWTVVLCAALPISSLFPFLYFMVRDFHIAKTEADISSYAGYVGSAFMLGRCLTSALWGFVADIYGRKPVIVIGIIAVVIFNTLFGLSTSFWMAVITRFLQGSLNGLLGPVKAYASELVREEHQALAISTVTAAWGIGLIIGPAVGGYLSQPVEKYPNIFPEDSFWNKFPYFLPNLVISAVAFVVAIGCIWIPETLHNHKCSNESIDNAEALENGGSVEGKDKIIQKNENLLLNWPLMSSVIVYCVFALHDIAYQEVFSLWAVSPERLGGLSFTTDDVGNVLSISGLALIIYQLTVYPYVEKATGPIRIARISGMVAIPLLQSYPFIALLSGIALYTLLTIASILKNILSVTINTGLFLLQNRAVEQHQRGAANGISMTGMSLFKAIGPATVGALLTWSQKRMDASFLPGTHLVFFVLNIVEAVGLLMMFKPFLVEKKKTHSDQLH 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00027 488 Gene3D MFS general substrate transporter like domains 37 471 IPR036259 -
Spst11g00027 488 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 35 472 - -
Spst11g00027 488 SUPERFAMILY MFS general substrate transporter 23 476 IPR036259 -
Spst11g00027 488 CDD MFS_SLC46_TetA_like 44 473 - -
Spst11g00027 488 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 479 IPR020846 GO:0022857
Spst11g00027 488 PRINTS Tetracycline resistance protein signature 344 364 IPR001958 GO:0022857
Spst11g00027 488 PRINTS Tetracycline resistance protein signature 113 137 IPR001958 GO:0022857
Spst11g00027 488 PRINTS Tetracycline resistance protein signature 170 192 IPR001958 GO:0022857
Spst11g00027 488 FunFam Protein ZINC INDUCED FACILITATOR-LIKE 1 39 471 - -
Spst11g00027 488 Pfam Major Facilitator Superfamily 45 289 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00027 Spst-Chr11 505089 511857 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00027 11 505089 511857 Spst11g00027 11 505089 511857 ECH