Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00026 ATGATGCACGTGAACTTAGTGAAGGAAGTTGGTCATCTCAGAAACATGGAAGCGGAGAATGGTGAACAGCCATTGTTGGAGAGGAAGAAGTACTACGAGAACTGCCCCGGATGTAAAGTGGACAAAGCCAAAGAGTTGAGTGAGGGACAGGGTGTGCCCGTTACGAAGCTTTTTATTATGTGGATGGTGGTGCTGTGTGCTGCACTGCCAATATCATCTCTTTTTCCATTCCTCTATTTCATGGTAAAGGATTTTAATATTGCGAAAACAGAAGCTGATATTAGTTCTTATGCTGGTTATGTTGGTTCTGTATTCATGCTTGGCAGATGTTTGACATCTTTGTTGTGGGGAACTATATCTGATCGCTTTGGTCGGAAACCTGTTATACTAATAGGGATTATTTCAGTTGTCATTTTCAACACACTATTTGGCCTTTGCACAAGTTTTTGGATGGCTATTATCACGAGATTTCTTCTGGGAAGTTTCAATGGTTTTCTTGGACCAGTGAGGGCCTATGCCACTGAACTTTTTAGAGAGGAACACCAAGCTCTAGGACTCTCAACTGTAAGCTCGGCTTGGGGCATAGGTTTAATAATTGGCCCAGCATTGGGAGGCTATTTGGCTCAGCCAGTAGAGAAGTATCCAAATATATTTCCAAAGAATTCCTTTTGGGACAAGTTTCCATACTTCTTGCCCAGCTTCATAATATCAGCATATGCATTAATAGTAGCTATTGGCTGCATCTGGATTCCAGAAACCCTTCACAACCACTATCCTAGCAATGAATCCATTGAGTATGCTGAAGCATTAGAAAATGGAAGTAGTGGCGCAAGCAATGAAAAGATAATAAAAGACAACGGAAACCTTTTTCTGAATTGGCCCTTAATGTCATCTATCATTGCTTATTGTGTCTTCTCACTTCATGATATTGCTTATCAAGAGATTTTCTCCTTATGGGCAGTGAGCCCTCGAAGGTTGGGGGGTTTGAACTTCACAACTAATGATGTGGGTAACATTCTGGCAATATCAGGTTTTGCACTTATAGTTTACCAACTTACCTTGTACCCATCTGTGGAAAAAGCTAGTGGACCTATTGGTATTGCCCGCATCTCAGCGATGTTATCCATACCTCTTTTGCAAAGCTACCCCATCATTGCATTGTTGTCAGGCTTAGCACTATACATAGTGTTAAGTGTTGCTTCAATGCTGAAGTATATTCTGTCTATCACCATCGTAACTGGTTTGTTCCTTCAACAAAACCGAGTAGTGGAACAACAGCAAAGAGGGGCAGCCAATGGCATTGCTATGGCAGGCATGTCTCTATTCAAAGCTATTGGCCCTGCCACAGGTGGTTCAGTATTAGCTTGGTCACAAAAGCGGATGGATTCTTCATTCCTCCCAGGCACCCATATGGTGTTCTTTGTCTTGAACATAGTTGAAGCAGTTGGATTACTAATGATGTTCAAACCATTCTTGGTTGAAAAAAAGAAAACACACACAGATCAATTACAGTGA 1515 0.4158 MMHVNLVKEVGHLRNMEAENGEQPLLERKKYYENCPGCKVDKAKELSEGQGVPVTKLFIMWMVVLCAALPISSLFPFLYFMVKDFNIAKTEADISSYAGYVGSVFMLGRCLTSLLWGTISDRFGRKPVILIGIISVVIFNTLFGLCTSFWMAIITRFLLGSFNGFLGPVRAYATELFREEHQALGLSTVSSAWGIGLIIGPALGGYLAQPVEKYPNIFPKNSFWDKFPYFLPSFIISAYALIVAIGCIWIPETLHNHYPSNESIEYAEALENGSSGASNEKIIKDNGNLFLNWPLMSSIIAYCVFSLHDIAYQEIFSLWAVSPRRLGGLNFTTNDVGNILAISGFALIVYQLTLYPSVEKASGPIGIARISAMLSIPLLQSYPIIALLSGLALYIVLSVASMLKYILSITIVTGLFLQQNRVVEQQQRGAANGIAMAGMSLFKAIGPATGGSVLAWSQKRMDSSFLPGTHMVFFVLNIVEAVGLLMMFKPFLVEKKKTHTDQLQ 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00026 504 CDD MFS_SLC46_TetA_like 60 489 - -
Spst11g00026 504 Gene3D MFS general substrate transporter like domains 55 488 IPR036259 -
Spst11g00026 504 SUPERFAMILY MFS general substrate transporter 57 498 IPR036259 -
Spst11g00026 504 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 51 488 - -
Spst11g00026 504 Pfam Major Facilitator Superfamily 61 399 IPR011701 GO:0022857|GO:0055085
Spst11g00026 504 ProSiteProfiles Major facilitator superfamily (MFS) profile. 56 495 IPR020846 GO:0022857
Spst11g00026 504 FunFam Protein ZINC INDUCED FACILITATOR-LIKE 1 55 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00026 Spst-Chr11 495916 503110 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00026 11 495916 503110 Spst11g00026 11 495916 503110 ECH
Spst5g01972 5 55239485 55243764 Spst11g00026 11 495916 503110 PCT