Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00024 ATGATGCCACTGGTTTTAGTTGTGTTCTCATGTTTACTTTTTGCATTATCAAAGCAAGGATATGTCCTAGAGATTCTCCTTGAAAGAGAGACCTGGGTGAAACAAGTCGCAGGGTCCTATTCTATCATAAACATGGGAGAGGAGAATGTTAAACAGCCATTGTTGGAGAGGAAGAAGTACTACGAGAACTGCCCCGGTTGCAAAGTCGATCAAGCCAAAGAGCTGAGTGAGGGACAAGGTGTACCCTTTAGAAATCTTTTTATCATATGGATGTTGGTGTTGTATACTGCACTGCCAATAGCATCTCTCTTTCCATTCCTTTATTTCATGGTCAGGGATTTTAATATTGCGGAAACAGAAGCTGATATTAGTTATTATGCTGGTTATGTGGGTTCTGCTTTCATGCTTGGCAGATGTTTGACATCTGTGTTGTGGGGAATGGTAGCTGATCGCTATGGTCGAAAGCCTGTAATAGTTATAGGGGTTGTTGTAATTGTCATTTTCAACACACTATTTGGCTTTAGCACAAGTTTTTGGATGGCTGTTATTACGAGATTTTGTCTGGGAAGTTTAAATGGTATGCTTGGACCAGTGAAGGCCTATGCCACTGAAATTTTTAGAGAGGAACACCATGCTATAGGGCTCTCAACTGTCAGTGCAGCTTGGGGCACAGGTTTAATCATTGGCCCAGCATTGGGAGGCTATTTGGCTCAGCCAGTAGAGAAGTACCCAAATGTATTTCCAAAGGATTCCTTTTGGGACAAGTTTCCATACTGCTTGCCCAACCTTATAATATCAGCATTAGCGTTTATAGTAATTATTTGCTGTTTCTGGATTCCGGAAACACTTCACAACCACAGTTCTAGCAGTGAGTCCATAGACGATGTCGAAGCTATAGAAAATGGAAACAGTGGAGCTGACAAAGAAATGATAATCCAGAAGAAGGAAAACCTCCTCCTGAATTGGCCCTTAATGTCATCTATCATTATTTATTGTGCTTTCTCACTTCATGATATTGCTTATCAAGAGGTTTTCTCATTATGGGCTGTCAGTCCTCGAAAGCTAGGGGGTTTGAGCTTCTCAACTAATGATGTTGGTAATGTTCTTTCAATAACAGGTGTTGCTCTTATCATTTACCAACTTTTGGTATATCCATCTGTGGAAAGAGCTTGTGGACCTGTTGGAATTGGGCGCATTACAGGGATGTTATCAATACCTCTTTTGCAAAGCTACCCCTTCATTGCATTGTTGTCCGGCGTCGCAGTATACGTAGTCGTAGTTATTGCTTCAATTCTAAAGAATATTCTGTCTACCACCATTATTACTGGTTTGTTCCTCCTACAAAACCGAGCAGTGGAACAACACCAAAGGGGGGCTGCTAATGGCATTGCTATGACAGCCATGTCTCTATTCAAAGCTATTGGCCCTGCTGCAGGTGGTGCAGTATTAACTTGGTCACAAAAGCGGATGGATGCTTCATTCCTCCCAGGCACTCATATGGTGTTCTTTGTCCTGAACATAGTTGAAGTTGTTGGAATATTAATGATGTTCAAACCATTCTTTGCTGAGAAGAAGAAAACACCCTCAGATCAGTTACACTGA 1602 0.4157 MMPLVLVVFSCLLFALSKQGYVLEILLERETWVKQVAGSYSIINMGEENVKQPLLERKKYYENCPGCKVDQAKELSEGQGVPFRNLFIIWMLVLYTALPIASLFPFLYFMVRDFNIAETEADISYYAGYVGSAFMLGRCLTSVLWGMVADRYGRKPVIVIGVVVIVIFNTLFGFSTSFWMAVITRFCLGSLNGMLGPVKAYATEIFREEHHAIGLSTVSAAWGTGLIIGPALGGYLAQPVEKYPNVFPKDSFWDKFPYCLPNLIISALAFIVIICCFWIPETLHNHSSSSESIDDVEAIENGNSGADKEMIIQKKENLLLNWPLMSSIIIYCAFSLHDIAYQEVFSLWAVSPRKLGGLSFSTNDVGNVLSITGVALIIYQLLVYPSVERACGPVGIGRITGMLSIPLLQSYPFIALLSGVAVYVVVVIASILKNILSTTIITGLFLLQNRAVEQHQRGAANGIAMTAMSLFKAIGPAAGGAVLTWSQKRMDASFLPGTHMVFFVLNIVEVVGILMMFKPFFAEKKKTPSDQLH 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00024 533 Pfam Major Facilitator Superfamily 90 432 IPR011701 GO:0022857|GO:0055085
Spst11g00024 533 FunFam Protein ZINC INDUCED FACILITATOR-LIKE 1 84 516 - -
Spst11g00024 533 Gene3D MFS general substrate transporter like domains 83 516 IPR036259 -
Spst11g00024 533 ProSiteProfiles Major facilitator superfamily (MFS) profile. 85 524 IPR020846 GO:0022857
Spst11g00024 533 CDD MFS_SLC46_TetA_like 89 518 - -
Spst11g00024 533 SUPERFAMILY MFS general substrate transporter 84 526 IPR036259 -
Spst11g00024 533 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 80 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00024 Spst-Chr11 411528 416811 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00024 11 411528 416811 Spst11g00024 11 411528 416811 ECH