Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00020 ATGGACATCGAGCAGAGGCAGTCAGAGCTCATCGATCACTTCATCCAGCGAGCCTCTGCGGCCTCCGACGCAGCCGCACTCGCCTCTGTCCTCGTCGAAGCCACTTCTCACCCTTCGCTCTTCGCTTTTTCCGAGATTCTCGCTCTCCCCAATCTTCTTCAGCTTGAAGCAACTGAGAATTCTGCTTACCTCGATATGCTTCGTTTGTTTGCGCATGGAACATGGAGCGATTACAAGAGTAATGCTGACCGTTTACCACAATTAATACCTGATCAGATGCTCAAGCTTAAGCAACTTACAGTTCTTACACTGGCTGAGACATACAAGGTACTACCTTATGACCAATTGATGCAGGATTTAGATGTGACAAATGTTCGTGAACTTGAAGATTTTCTAATTAATGAATGCATGTATGCGGGAATAGTCCGAGGAAAGCTGGATCAGTTGCGGCGATGCTTTGAGGTCCAATTTGCAGCAGGTAGGGACTTGAGGCCTGATCATCTGGGGAATATGATCCAGACTCTCTCTAACTGGTTGTCTACATCAGAAAGTCTGCTTGTTTCAATCCAAGAGAAGATAAAATGGGCTGATGCTATGAGTGAAATTGACAAGAAGCACAGGAAGGATGTGGAAGAGAAGGTGGAAGAAGTAAAGAAGTCCATTTTCAAGCCCTACTCAACTGGAGAAGTTACACACTGTAAGCAGGCCGACGTCGACTTCAGAGGCCATGAGGAGATCTGCTCTGAATCTGGTGGAGTGATGGATTATGAAGAAGATCGAAGCCGACCAAAGAGTTTGACTTGGATACTGTATGCATTGAAATGCCTTAAATGTGAGGCGGCATCCAATTTCTTGAAGATTGTAGTAGATAAAGGAGCTCATGGGATGAGTTCTTTAGTTGCTTGCCTGACTTTTTCACGGCATGTGTCAACAGAGGATATCAGCTTTTGCAGACAAGCATATCTCATCGATATTGCTCTTGTCTGTCACACCACAAAGCGAGATAGGAACAACGGAAAAAAAAGGGGGAAAACCTGTTAA 1041 0.4524 MDIEQRQSELIDHFIQRASAASDAAALASVLVEATSHPSLFAFSEILALPNLLQLEATENSAYLDMLRLFAHGTWSDYKSNADRLPQLIPDQMLKLKQLTVLTLAETYKVLPYDQLMQDLDVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPDHLGNMIQTLSNWLSTSESLLVSIQEKIKWADAMSEIDKKHRKDVEEKVEEVKKSIFKPYSTGEVTHCKQADVDFRGHEEICSESGGVMDYEEDRSRPKSLTWILYALKCLKCEAASNFLKIVVDKGAHGMSSLVACLTFSRHVSTEDISFCRQAYLIDIALVCHTTKRDRNNGKKRGKTC 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00020 346 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 87 178 IPR000717 -
Spst11g00020 346 Pfam PCI domain 63 155 IPR000717 -
Spst11g00020 346 ProSiteProfiles PCI domain profile. 1 160 IPR000717 -
Spst11g00020 346 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17 13 219 IPR045237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00020 Spst-Chr11 333041 339218 Dispersed