Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00001 ATGGCCGCCAAGCCTCCTTCCTTCTCCCCCTCTCGCACCACTTGCGCCTCTCTCCTTCGAGAATTGCAGATGATATGGGATGAGATTGGGGAGAGTGACAATGATAGAGACAACATGCTTCTTCAACTGGAGCAAGATTGCCTTGACATTTATCACCGCAGAGTTGAGGAGACGAGGAAGCACAAGGCTGATATGTATCAGTGGTTGGCTGACGCTGAAGCTCAAGCAGCCAATATCGTTTCTTCCCTTGGGGAAAGTACCGTGCTCCCACGGACATTGAATATCAACTACATGGCTTTCCATGTTGTTGAGATAGAAAGACCACGTGGGAAGGGAACCCTGAAGCAGCAAATAGCTACCATGAGACCTATCTTAGAGGATTTGAGGTCAAAGAAGGATGACAGAATCAAGGAATTTTTGAAGATAAAGTCCCAAATTTCTCAGATATGTGATGAAATAGCAGGTTGTGGGCAGTACAAAAGTGTCACGGAATCAGATGTTAATCAAAGTGATCTAACAGCAAAGAAATTGGGGGAACTCAAGTCACATCTACAGGAGCTTCAGAATGAAAAGATCTTGCGCCAGCAGAAAGTGAAGAGTCACATCAGTACTATTAGTGAGCTTACAGTAGTAATGTCAATTGATTTTGGGAAGACATTAAATGAAATTCACCCAAGCCTGGGCGATTCATTGAAAGGTACACTACAGAGCATCAGCAATGACACTCTTGCCAGATTAACCGGGGTTATTCATTCATTAAAGAGGGAGAAGCAACAAAGGCTACAAAAGATACAAGAGCTTGGTAAATCGCTGGTAGATCTATGGGATCTCATGGAGACACCAACTGAAGAGCAAAAGGCCTTTAGCCATATTACTAGATTAATTTCAGCATCAGTGGATGAAGTGGCAACACATGGTTGCCTTTCTGCAGAAGTCATTGAGCAGGTTGAAGGTGAAGTCCTGCGCTTAAATGTTGTGAAAGCTAGTAAAATGAAGGATTTAGTGTTTAAGAGGCAGAATGAGCTTGAAGAAATTTACAGAGGGGTTCACATGGATGTCGAAAGTGAATCTGCAAGACAGATTTTGACTGGCCTCATTGAATCCGGTAATATCGATCTCTCTGATTTGCTTCAAAGTATGGATGATAAAATAAGACAAGCCAAAGAGCAAGCTCTAAGCAGACGAGATATCTTAGATAGGACAGAGAAATGGAAATTTGCAGCTGAGGAGGAAAAGTGGTTAGATGAATATGAAAGGGATGAAAATCGATATAGTGCGGTAAGAGGAGCACACAAAAATTTGAAGCGCGCCGAGAAAGCTCGGATTCTTGTCAGCAAGATACCATCTATGGTTGAGAATTTGACTGCAAAAGTAAAAGTGTGGGAAATGGAAAAAGGAATATCTTTCTTATATGAAAAGGTTCCATTATTAAATAGATTAGATGAATATACTATACATCGGCAACTGAGAGAAGAAGAGAAGCGAAAAAATCGGGAGCAGAAGCGGCTACAGGAACAAGCAGCTGTAGAGCAAGAGGCACTTTTTGGTTCAAGGTCTGCAACGAAGAAGCCTCTGGGTCAGAGCAACAATGCCAACACCATAGCAGGGACACCAACCGGACGGCGACTGCTTGGGCCTTCCGGCCGCCATGGAACCTCAGCAGGAAAGGAACGCAGAGAAAGTGGGAGAATGAACAGCATAATTCCAGTGAACTATGTTGCTCTTCCAAAAGATGATTCTGTTTCTAGGGGCAATTGA 1758 0.4323 MAAKPPSFSPSRTTCASLLRELQMIWDEIGESDNDRDNMLLQLEQDCLDIYHRRVEETRKHKADMYQWLADAEAQAANIVSSLGESTVLPRTLNINYMAFHVVEIERPRGKGTLKQQIATMRPILEDLRSKKDDRIKEFLKIKSQISQICDEIAGCGQYKSVTESDVNQSDLTAKKLGELKSHLQELQNEKILRQQKVKSHISTISELTVVMSIDFGKTLNEIHPSLGDSLKGTLQSISNDTLARLTGVIHSLKREKQQRLQKIQELGKSLVDLWDLMETPTEEQKAFSHITRLISASVDEVATHGCLSAEVIEQVEGEVLRLNVVKASKMKDLVFKRQNELEEIYRGVHMDVESESARQILTGLIESGNIDLSDLLQSMDDKIRQAKEQALSRRDILDRTEKWKFAAEEEKWLDEYERDENRYSAVRGAHKNLKRAEKARILVSKIPSMVENLTAKVKVWEMEKGISFLYEKVPLLNRLDEYTIHRQLREEEKRKNREQKRLQEQAAVEQEALFGSRSATKKPLGQSNNANTIAGTPTGRRLLGPSGRHGTSAGKERRESGRMNSIIPVNYVALPKDDSVSRGN 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00001 585 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 524 - -
Spst11g00001 585 Coils Coil 486 509 - -
Spst11g00001 585 MobiDBLite consensus disorder prediction 511 567 - -
Spst11g00001 585 Gene3D - 384 517 - -
Spst11g00001 585 Coils Coil 370 390 - -
Spst11g00001 585 MobiDBLite consensus disorder prediction 521 537 - -
Spst11g00001 585 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 581 IPR007145 GO:0000226|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00001 Spst-Chr11 2514 9243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00001 13 551 EF-hand Containing Proteins AT5G62250 36.282 2.86e-97 305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00001 11 2514 9243 Spst11g00001 11 2514 9243 ECH