Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01481 ATGATGGATTCTCCCTCTTCATCCTCCTCCTCCGATTTTGCTTCCATAGCCACCGCCAATCAGAGTGCCTCCCGGAGCGACGGAGAAGGGGCTGCGGCGGAGCAGTCGCGGCGGTGGCACGACGTGTTCTGGTTAGGAATATTCTTAATCCATTTGATTGGGCTGGGGTTCCTTCTGGGAGTTCTTGGTCTGAATAGGTTTGAAAGAGAGAATAGACTTAACATTGACAAGTTCACCTCCCGGTTTTCTGAGAACCAATCCGGATTGACTGAGACTTACTGGCCACTCTATGCTGCCGCTGGTGGGGTTGGAACTGTTCTTGGATGGTGTTGGTTGCTGTTGTTGGGGTCCCAGGCAACTCAAATGATGAAGGTGTCTGTTCACATACTCACCACTTACCTTGCTGTCATCAGTGTTTTGTGTTTCTGGGCTGGCCAGATTTTCTGGGGGGTTGCTTTTGCCATTGGAGCTTTTCTGCAGTTCCTTTATGTCATATCAGTCATAGACAGACTCCCATTTACGATGTTGATTCTGCAAAAGGCTGTGAAGATGGTTTGGAATCTTCCTGAGGTTATGAGAGTGGCATATGCATTTATGTTTGTTGTGCTTTTATGGATGACCTTATGGTCATTTGGAGCTGCAGGTGTTGTGGCTTCAAGCATGGGTGATGGTGGACGCTGGTGGCTTCTTGTGGTTCTCTCTATGAGCTTATTTTGGACAGGTGCAGTACTATGTAATACTGTGCATGTTATAGTGTCTGGGATGGTGTTTCTTGTTCTTGTTCATGGGGGTAGAGATGCAGCTTCAATTCCTGCTAACTCCTTAGTGAAATCTCTACAGTATGCTTTAACAACATCGTTTGGCAGCATTTGCTATGGTTCATTATTTACTGCAGCTATCAGGACACTACGATGGAAGATAAGAGGATTTCGGTCTAAGATTGGCAATAATGAGTGTTTACTTTGCTTTGTCGATTTCCTTTTCCATCTTGTGGAGACTCTTGTTCGTTTCTTTAACAAGTATGCCTATGTTCAGATTGCTATTTATGGTAAAAGCTTTAACCGGTCGGCTAGAGATGCATGGGAGTTACTCCAGTCAACTGGGGTTGAAGCACTTGTGGCTTATGATTGTTCTGGTGCTGTGCTTCTAATGGGTACTATTTTTGGTGGGCTGATAACTGGAACTTGCTCTGGCATTTGGGCATGGGTTAAATGGAGCGACAGAGTTCTTATGATTGGATTAACGTCCATGCTGATGGGGATGGTATTGGTTGGATTGGCAATGGTCGTGGTGGAAAGTGCTGTTACGTCCATATACATCTGCTATGCAGAAGACCCCTTACTGATTCAAAGATGGGATGCTGAATTTTTCAACCAAATGTCTGAGACACTGCATCAGCGACTTCAATACAGGAGTGCTAGAGCAAGGGAAGTTTTAACCCAAAATCGATTTGATGACCTTGTTCCCCAAAATGCACCTATTTGA 1485 0.4519 MMDSPSSSSSSDFASIATANQSASRSDGEGAAAEQSRRWHDVFWLGIFLIHLIGLGFLLGVLGLNRFERENRLNIDKFTSRFSENQSGLTETYWPLYAAAGGVGTVLGWCWLLLLGSQATQMMKVSVHILTTYLAVISVLCFWAGQIFWGVAFAIGAFLQFLYVISVIDRLPFTMLILQKAVKMVWNLPEVMRVAYAFMFVVLLWMTLWSFGAAGVVASSMGDGGRWWLLVVLSMSLFWTGAVLCNTVHVIVSGMVFLVLVHGGRDAASIPANSLVKSLQYALTTSFGSICYGSLFTAAIRTLRWKIRGFRSKIGNNECLLCFVDFLFHLVETLVRFFNKYAYVQIAIYGKSFNRSARDAWELLQSTGVEALVAYDCSGAVLLMGTIFGGLITGTCSGIWAWVKWSDRVLMIGLTSMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDAEFFNQMSETLHQRLQYRSARAREVLTQNRFDDLVPQNAPI 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01481 494 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 7 473 IPR007603 GO:0022857|GO:0055085
Spst10g01481 494 Pfam Plasma-membrane choline transporter 152 446 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01481 Spst-Chr10 15428680 15432525 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01481 10 15428680 15432525 Spst10g01481 10 15428680 15432525 ECH