Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01480 ATGCAAAGCTTCAATCCAACCGAATCAGAATCAACCTCACCACTCTATTCCCATTCCTCCTTCTTTCACCGGGGAAATGACACCAGCCGAAATCCCACGCGTTTCTCGGATTTTCAGCATTCTTTTCGACAGCTCGATGCTGTTGATTTAAGCTCAAGTTCTGTGTTTGGTGCAAAGTCGAACAATGTGGCTGTTATTGCAAGCAACTTGCAGTGTGGGGCATTCGACACGAACCTTGGAGGTGCAGAGTTTGCTTCGGCAGTTGGAGGGAGTGTTGAGACAGAGCGGCAACACATGTATCAGAGAGGAACAAACAACGCCACCATGTCCATGGGGAGCCAGTATGTTGAGAAATGGGCAGATGATAGCCAACACACTGAAGATACTTGCACAGACATCGACACCGATGACAAGAATCAATGTTTTTCAACCGTGTCTTGGGGCAATGGAGTTGGGGACGGGGCACTTGTAGTCGTGGACTCCCAGGATCAAAGTACAATTAAAGCTGAAGACCATAAGACTGTACGTAGGCTAGCTCAGAATCGGGAGGCTGCAAGGAAGAGTCGGTTGAGGAAAAAGGCATATGTGCAACAGTTGGAGAACAGTCGAGTTAGGCTTGCACAATTAGAGCAAGAGGTTCAGCGGGCACGTCAGCAGGGTGTTCTTATTGCAACTGGAATCTCGGGGGATCGCGGTCATTCAGTTGTTGGAAATGGCGCGTTAGCATTTGACATGGACTATGCCCGTTGGGTTGATGAGCATCAACGGCTGATCAATGACTTAAGATCAGCTATAAATTCTCGAGTGGGTGATAATGAACTGCATCTTCTTGTTGATGGAGTCATGGCACATTATGATGAATTATTCAGGTTGAAGAGCATAGGGGCTAAGGCTGATGTATTTCACATACTTTCTGGGATGTGGAAGACTCCTGCAGAAAGATGCTTCATATGGCTTGGTGGATTTCGTTCATCCGAACTTCTCAAGATAGTTAGAAACCAGCTTGAGCCATTAACAGAAGAGCAGTTAATGGGCATTTACAATCTGCAACAGTCTTCCCAGCAGGCTGAGGATGCATTATCACAAGGCATGGAAGCATTGCAGCAGTCTCTTTCAGAGACACTTTCGTCCTCTACCCAAGGACCCTCTGCTTCTGGAAATGTTGCCGAGTACATGGGCCAAATGGCTATTGCATTGGGCAAGCTTGCCACACTAGAGAGTTTCCTTCATCAGGCTGATCTCTTGAGGCAACAAACTCTGCAACAGATGCGTCGAATTTTGACCACGTTCCAAGCTGCGCGTGCACTCCTCGTCATAAATGATTACGTTTCACGACTCAGAGCTCTTAATTCGTTATGGTTAGCGTGCCCTAGAGAGTACTAG 1383 0.4722 MQSFNPTESESTSPLYSHSSFFHRGNDTSRNPTRFSDFQHSFRQLDAVDLSSSSVFGAKSNNVAVIASNLQCGAFDTNLGGAEFASAVGGSVETERQHMYQRGTNNATMSMGSQYVEKWADDSQHTEDTCTDIDTDDKNQCFSTVSWGNGVGDGALVVVDSQDQSTIKAEDHKTVRRLAQNREAARKSRLRKKAYVQQLENSRVRLAQLEQEVQRARQQGVLIATGISGDRGHSVVGNGALAFDMDYARWVDEHQRLINDLRSAINSRVGDNELHLLVDGVMAHYDELFRLKSIGAKADVFHILSGMWKTPAERCFIWLGGFRSSELLKIVRNQLEPLTEEQLMGIYNLQQSSQQAEDALSQGMEALQQSLSETLSSSTQGPSASGNVAEYMGQMAIALGKLATLESFLHQADLLRQQTLQQMRRILTTFQAARALLVINDYVSRLRALNSLWLACPREY 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01480 460 PANTHER TRANSCRIPTION FACTOR TGA9 99 459 - -
Spst10g01480 460 SUPERFAMILY Leucine zipper domain 173 212 IPR046347 GO:0003700|GO:0006355
Spst10g01480 460 ProSiteProfiles DOG1 domain profile. 240 456 IPR025422 GO:0006351|GO:0043565
Spst10g01480 460 MobiDBLite consensus disorder prediction 1 32 - -
Spst10g01480 460 Coils Coil 192 219 - -
Spst10g01480 460 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 215 IPR004827 GO:0003700|GO:0006355
Spst10g01480 460 Pfam Seed dormancy control 258 332 IPR025422 GO:0006351|GO:0043565
Spst10g01480 460 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 176 191 IPR004827 GO:0003700|GO:0006355
Spst10g01480 460 Pfam bZIP transcription factor 172 212 IPR004827 GO:0003700|GO:0006355
Spst10g01480 460 SMART brlzneu 169 222 IPR004827 GO:0003700|GO:0006355
Spst10g01480 460 FunFam BZIP family transcription factor 172 221 - -
Spst10g01480 460 Gene3D - 172 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01480 Spst-Chr10 15420245 15423594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01480 12 459 bZIP Transcription Factor Family AT1G68640 55.411 7.02e-160 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst10g01480 DOG1 3e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01480 10 15420245 15423594 Spst10g01480 10 15420245 15423594 ECH