Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01478 ATGGCTACTCTTACCTCAAATGTAAACCTTAGTCCACAATACACTGCTCTCAAAGACTACAATCCACCTCATGGTTGTGTAGTTGAGGAAATTGCAGGGCTTATTAGAGTACACAAAGATGGATACGTGGAACGACCACAAGTTGTTCCATGTGTCACTGCCAGTACTATGAGTTCAGAGCTAAACGTGACATCTCGAGACATGGTCATTGACAGTGCCACAAACACATGGGCACGTTTTTATGTTCCAATTTGCCAACACAGGTTACCATTGCTCGTTTATTTTCACGGTGGAGGCTTTTGTGTTGGGTCAGCAGCATGGAGTTGCTACCATGATTTCCTTGCAAGGCTATCTGCCAAAGTGGGGTGTGTGACTATGTCAGTGAACTATCGATTGGCCCCAGAGAACCCTCTTCCAGCTCCCTATGATGATGGATTAAAGGCCCTAATGTGGGTGAAACAACAAATGCTATATCAGCAACACAACAAGGGTAGTGGTAGTAATAGTGAATGGTGGACTACACAGTGCACCTTCTCTAGTGTCTTCTTAGGTGGGGACAGTGCTGGTGCTAACATAGCCTACAACGTTGCCACAAGGATAGCTGCATGTGATGGTGCTGCTTTAAGTCCTTTGAATTTGAAAGGTCTTATTTTGATACAACCCTTTTTCGGTGGGGAAGTGAGAACAAGTTCTGAGAAATGCATGGCTCAATCATCGGGTTCTGCTTTGAACTTGGCAGCATCTGACACTTACTGGCGCTTGGCGTTACCTTGTGGTGCGAACCGTGACCACCCGTGGTGCAACCCTTTGGTGAAAGTGAAGTTGGAGGAGTTGAAGCTCTTGCGTACCTTGGTGTGCATCTCGGAGCTGGATATATTGAAGGATAGGAACTTGGAGTTTTGTGATACTTTGGTGAGAGCAGGGAAAAGGGTTGAGTATGGAGTGTTCAGAGGTGTTGGACATGCGTTTCAGATTTTGAGTAAGTCTCAGGTAGCCAAGAACAGAACTAAGGAAATGATTGCTCGTGTTAAGTCCTTCATGGCTCTCTGA 1050 0.4571 MATLTSNVNLSPQYTALKDYNPPHGCVVEEIAGLIRVHKDGYVERPQVVPCVTASTMSSELNVTSRDMVIDSATNTWARFYVPICQHRLPLLVYFHGGGFCVGSAAWSCYHDFLARLSAKVGCVTMSVNYRLAPENPLPAPYDDGLKALMWVKQQMLYQQHNKGSGSNSEWWTTQCTFSSVFLGGDSAGANIAYNVATRIAACDGAALSPLNLKGLILIQPFFGGEVRTSSEKCMAQSSGSALNLAASDTYWRLALPCGANRDHPWCNPLVKVKLEELKLLRTLVCISELDILKDRNLEFCDTLVRAGKRVEYGVFRGVGHAFQILSKSQVAKNRTKEMIARVKSFMAL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01478 349 Pfam alpha/beta hydrolase fold 92 324 IPR013094 GO:0016787
Spst10g01478 349 SUPERFAMILY alpha/beta-Hydrolases 23 346 IPR029058 -
Spst10g01478 349 Gene3D alpha/beta hydrolase 33 348 IPR029058 -
Spst10g01478 349 PANTHER ARYLACETAMIDE DEACETYLASE 30 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01478 Spst-Chr10 15412639 15413688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01478 24 347 Carbohydrate Esterase AT1G68620 51.368 1.75e-117 342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01478 10 15412639 15413688 Spst10g01478 10 15412639 15413688 ECH