Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01445 ATGGCCACTGCTAGTCTCATACCATCCTCCTGGTTACCGCCGCTGTCTACTCCTTTCAAGGGAACTGTCAAAACCTTAGTTGCAAAACCATGCCTGAAGGTTCAGCGTGCAAGACCCCTCGTTTTCGTGGTTAATAAGGCTGCATCTGCCCCGGTGGCAGCGCCCATCGTCGGCGTTCGGTTTCGGCTGGACAATTTGGGGCCTCAACCGGGTTCGAGGAAGAGGGCCAAGAGAAAGGGTAGAGGAATATCGGCAGGGCAGGGAGCAAGTTGTGGTTTTGGGATGAGGGGTCAGAAATCTCGATCTGGGCCTGGCGTTAGGAAGGGTTTCGAAGGTGGCCAGATGCCCCTCTATCGACGAATCCCCAAACTCAGAGGAATTGCAGGAGGTATGCATGCGGGATTGCCCAAATATGTCCATGTAAATCTGAGAGACATAGAAGATGCTAAATTTAAGGAAGGGGAAGAGGTGTCTCTAGAGTCACTGAAGGCAAAAGGTGTGATTAACCCATCAGGAAGAGAAAGGAGACTTCCTTTGAAGATTTTGGGTGAAGGAGAACTGAGCAAGAAGTTGACGCTAAAAGCCCGTGCCTTTTCCACAGCGGCAAAGGAGAAACTTGAGAGTGCTGGATGTTCTCTCACCTTGCTTCCTGGCCGCAAGAAATGGGTTAAGCCATCGGTTGCTAAGAACCTTGCCCGCGCTGAGGAATACTTTGCCAAGAAGCGCGCCGCAGCCGCCACTGAGGCAGCCTCAGCTTGA 759 0.5231 MATASLIPSSWLPPLSTPFKGTVKTLVAKPCLKVQRARPLVFVVNKAASAPVAAPIVGVRFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVHVNLRDIEDAKFKEGEEVSLESLKAKGVINPSGRERRLPLKILGEGELSKKLTLKARAFSTAAKEKLESAGCSLTLLPGRKKWVKPSVAKNLARAEEYFAKKRAAAATEAASA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01445 252 Gene3D - 138 214 - -
Spst10g01445 252 NCBIfam 50S ribosomal protein L15 63 213 IPR005749 GO:0003735|GO:0006412|GO:0015934
Spst10g01445 252 Hamap 50S ribosomal protein L15 [rplO]. 63 216 IPR030878 GO:0003735|GO:0006412|GO:0015934
Spst10g01445 252 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 87 213 IPR021131 -
Spst10g01445 252 SUPERFAMILY Ribosomal proteins L15p and L18e 64 215 IPR036227 -
Spst10g01445 252 PANTHER 50S RIBOSOMAL PROTEIN L15 49 234 IPR005749 GO:0003735|GO:0006412|GO:0015934
Spst10g01445 252 ProSitePatterns Ribosomal protein L15 signature. 180 210 IPR001196 GO:0003735|GO:0005840|GO:0006412
Spst10g01445 252 MobiDBLite consensus disorder prediction 67 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01445 Spst-Chr10 14972294 14975205 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01445 10 14972294 14975205 Spst10g01445 10 14972294 14975205 ECH