Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01438 ATGAGGCTTTCCATTCTGCAACCCCAGCCGCAGCGCTGTCACCACCCCATAAAGCGCTCGCCCCGAATGGACGCCTCCTTCCACCGCCGCAAGGACAAGGTCGTCGTCATCATGGGCGCCACCGGCTCCGGCAAGTCCCGCCTCTCCATCGACCTCGCCACCCTCTTCCCCTTCTCCGAAATCATAAACTCCGACAAAATGCAAGTCTACCGCGGCCTCGACATCACCACCAACAAGATCCCCCTCGCCCAGCGCCGCGGCGTCCCCCACCACCTCCTCGGCGACGTCGACCCATCGCTCCCGGAGTTCTCCCCCGCCGACTTCCGCCGCCGCGCCGGCCAACTCATCACCGACATCACACGCCGGGATAACCTCCCCATCGTCGTCGGCGGCTCCAACTCCTTCGTCCACGCGCTTCTCGTCCAAGACTTCCACCCTCACTCCAACGTCTTCAACCACCACGAGGGGCTTATATCCTCTGAGTTGAGGTACAGGTGTTGCTTCCTCTGGGTCGACATAGCTTTCCCTGTGCTATCGCAATACTTGCGTGACAGAGTCGACGACATGCTTCACTCGGGGATGGTCGACGAGTTGGCTCAGTTCTTCGACCCGGACGCTTCGCGTCCAACCGGGTCTGGTCTGAGAAAAGCCATTGGGGTTCCCGAGTTCGACCAGTTTTTTAATAAGTACCCACCCTGGGCCGGCCCTGCGGGCCCGGGCGAGGGTCCTCTGCGGGAGCGTGCGTACGAGGAAGCGGTGCGGGCGATCAAGGAGAACACGTGTGAGTTGGCGGAGCGTCAGATGGGGAAGATCGAACGGTTGAAACGCGCTGGGTGGGACCTACGGAGGATCGACGCTACGGAAGCATTTCGAGTGGTGGTGACGTCAGGGTCCAACAATGGGTCCGATGTATGGGAGAGACAGGTGTTGGAACCAAGCGTGAAGATTGTGAAACGCTTCTTGATGGAGTAG 972 0.607 MRLSILQPQPQRCHHPIKRSPRMDASFHRRKDKVVVIMGATGSGKSRLSIDLATLFPFSEIINSDKMQVYRGLDITTNKIPLAQRRGVPHHLLGDVDPSLPEFSPADFRRRAGQLITDITRRDNLPIVVGGSNSFVHALLVQDFHPHSNVFNHHEGLISSELRYRCCFLWVDIAFPVLSQYLRDRVDDMLHSGMVDELAQFFDPDASRPTGSGLRKAIGVPEFDQFFNKYPPWAGPAGPGEGPLRERAYEEAVRAIKENTCELAERQMGKIERLKRAGWDLRRIDATEAFRVVVTSGSNNGSDVWERQVLEPSVKIVKRFLME 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01438 323 Pfam IPP transferase 159 268 - -
Spst10g01438 323 Pfam IPP transferase 68 144 - -
Spst10g01438 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 205 IPR027417 -
Spst10g01438 323 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 321 IPR039657 -
Spst10g01438 323 Coils Coil 322 323 - -
Spst10g01438 323 MobiDBLite consensus disorder prediction 1 25 - -
Spst10g01438 323 Gene3D - 31 321 IPR027417 -
Spst10g01438 323 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 175 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01438 Spst-Chr10 14900128 14901099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01438 163 321 C2H2 Transcription Factor Family AT2G27760 29.834 2.90e-13 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01438 10 14900128 14901099 Spst10g01438 10 14900128 14901099 ECH