Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01419 ATGAAGGGCCAAAATAATCAATACCCCTTAAACTCTGTTTCCAAGTTTTTTAATGTTCAATTTCACTTTATTCAGTTTCTTTCCTATATCCTAATTCTGGGCTTTGGTATAACCATTGGGGTTATCCTTAGTTTTTATCTTAAAGACTGCAACTTTAGTTTACAATTCACGCAGTTGTCACTCTCTTCCTTTCCGCGAGCACCACCCTTGCCGACACCAACTACAAAACCAGAAATATCTAATCAAACTCAAATTCAGTCCCAAGTTCAAACTCAGACAGAAATTCAAACTCAAACTCAAACTCAAACTCAAACTGAAAGTAGCCACGTAGGATTGAGGGATTTCCTTAAGCCTCCTCATGTTGTGCATGATATGGATGATGAGGAATTGCTATGGAGAGCTTCGATGACAGCAAAGATCCCTGATTACCCGTTTGATCGTGTTCCAAAGGTTGCCTTCATGTTCTTGACAAGGGGTCCTGTGTTTTTGGCACCTTTGTGGGAGCAATTCTTCAAAGGGCATGAAGGGTTGTACTCAATTTATGTGCACTCCAATCCATCATACAATGGATCACGCCCGGAGAGTCCTGTGTTTGAAGGTCGGAGAATTCCCAGTAAGGAAGTTGAATGGGGCAATGTGAACATGATTGAAGCTGAACGTCGCTTGCTGGCGAATGCACTTCTTGATATCTCAAACCAACGCTTTGTACTGTTATCAGAGTCATGCATACCACTCTTCAACTTCTCAACCATCTACACCTACTTGATGAACTCTACCCAAAATTATGTCATGGCTTTTGATGATCCGAGTTCTGTTGGCCGAGGCCGATATAGCATCCAGATGTTGCCTGAGATCTCCCTAAACCAATGGAGAAAAGGGTCCCAATGGTTTGAAATGGACAGAGAGCTTGCACTAGAAGTAGTATCTGACAGAAAATACTTCCCAGTTTTTCAAGAGTACTGCAAAGGTTCATGTTACGCCGATGAACATTACTTGCCAACGTATGTGAGCATTAAGTTTTGGGAGGGTAATTCAAATAGGAGTTTGACTTGGGTTGACTGGTCAAAGGGTGGTCCACACCCAGCTAAATTTCTGAGGTCGGAGATTACTGTTCAGTTCTTGGAGAGTTTAAGGAATCAGAAATGCAAGTATAACGGAGATAGCATGAATGTGTGTTTTCTGTTTGCTAGGAAGTTTGCCCCTAGTACTGTGTCAAAGCTGACGAAGATTGCACCCATGGTAATGCATTTCTAG 1254 0.4203 MKGQNNQYPLNSVSKFFNVQFHFIQFLSYILILGFGITIGVILSFYLKDCNFSLQFTQLSLSSFPRAPPLPTPTTKPEISNQTQIQSQVQTQTEIQTQTQTQTQTESSHVGLRDFLKPPHVVHDMDDEELLWRASMTAKIPDYPFDRVPKVAFMFLTRGPVFLAPLWEQFFKGHEGLYSIYVHSNPSYNGSRPESPVFEGRRIPSKEVEWGNVNMIEAERRLLANALLDISNQRFVLLSESCIPLFNFSTIYTYLMNSTQNYVMAFDDPSSVGRGRYSIQMLPEISLNQWRKGSQWFEMDRELALEVVSDRKYFPVFQEYCKGSCYADEHYLPTYVSIKFWEGNSNRSLTWVDWSKGGPHPAKFLRSEITVQFLESLRNQKCKYNGDSMNVCFLFARKFAPSTVSKLTKIAPMVMHF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01419 417 Pfam Core-2/I-Branching enzyme 151 377 IPR003406 GO:0016020|GO:0016757
Spst10g01419 417 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 63 408 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01419 Spst-Chr10 14663146 14665623 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01419 10 14663146 14665623 Spst10g01419 10 14663146 14665623 ECH
Spst2g01935 2 18448816 18450179 Spst10g01419 10 14663146 14665623 ECH