Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01395 ATGAAAATGCGCGGTGGTGAAGTGGAAGTGAAAAGGGTGTTTATTGGAGCAGGATGCAACAGAATAGTGAACAACGTTTCATGGGGTGCTTCTGGCTTCGTCTCTTTTGGCGCTCACAACGCCGTTGCTATTTTCTGTCCCAAGAGTGCTCAAATTGTGACTACTCTTCCGGGTCACAAGGCAGCTGTGAATTGCACCCACTGGCTTCCAACTTCCAAGTTTTTATTTAAAGCAAAACAATTGAAGCAGCATTATTTGCTTTCTGGCGATGCAGATGGAGCTATTATGCTGTGGGAAATGTCCCTTGCTGATGGGAAGTGGAGGCAAGTGTTACAACTGCCACAATTACACAAGAAAGGTGTTACATGCATTAGTGGAATTATGGTTTCTCAGACTGAGGCACTTTTTGCATCTACTTCTTCAGATTGCACTGTTTGTGTATGGGAACTTGTTTTTCCAATTAATGGTAGCGGTGACTGTAAATTGTCGTGCCTGGATTCTTTCACGATTGGATCTAAATCCATGGTAGCCTTATCATTAGCTGAATTGCCTGGAGATGGTGGGCAAATTGTCCTCGCAATGGGAGGATTGGATAACAAGATTCACCTTTATTGTGGTGGAAGGACAGGAAAGCTTGTACATGCATGTGAACTAAAAGGTCATACAGATTGGATCCGGAGTTTGGACTTCTCATTGCCTATAAATGTGAATGGAGAAGTAAACAATATTTTTCTGGTGAGTTCATCACAGGATAAAGGCATTCGAATTTGGAAGATGGCGTTACGCAGCTCTATGTCAAATGGAAATGGCATATGCAAGAAAGGAGAAATAAGCTTATCATCCTATATAGAAGGGCCTGTGCTTTTGGCTGGTTCATCTTCTTTCCAGATATCCTTAGAATCTCTTTTAATTGGACATGAGGATTGGGTATATTCAGTAATGTGGCAACCCCCGTCGGTTTCATCCATAGAAGGGGATGCCTATTATCAACCACAAAGTATCTTATCTGCATCTATGGACAAGACTATGATGATCTGGCAACCTGAAAAGATTTCTGGTGTTTGGATGAATGTGGTTACTGTTGGGGAACTTAGCCACTGTGCTCTGGGGTTCTATGGTGGTCATTGGAGCCCAAATGGAGATTCAATTTTAGCACATGGATATGGTGGATCTTTCCATCTTTGGAAAGATGTTGGTAATGATAATTGGCTGACACAAAAGGTTCCCTCTGGTCACTTTGCACCAGTGACCGACATTGCCTGGGCTAGATCTGGTGATTATATTATATCTGCCAGTCACGACCAGACAACTAGAATTTTTGCTCCGTGGAAAATTGAGGCTTCTCTCCAAGATGGAGAATTTTGGCATGAGATATCTCGCCCTCAAGTTCATGGTCATGATATAAATTGTATGGCAGTTATTCATGGGAAGGGGAATCATCGTTTTGTCAGTGGAGCTGATGAAAAAGTTGCCAGAGTATTTGAAGCCCCATTATCATTTCTGAAGACATTAAATAATGCCACTTTGCACAAGTCTTGTCCTTCTGATGATATATTGGGAAATGTTCAGATTTTGGGTGCAAATATGTCAGCTCTTGGACTATCACAGAAACCTATTTATGTTCAAGCTGTACATGAGATCCCCGAAAGAAGTGAAATCGATGGTATTGACACTCTTGAAACTATTCCCGACGCCATTCCAACTGTGTTCACTGAACCTCCAATTGAAGATCAACTGGCCTGGCATACACTTTGGCCTGAATCACACAAACTCTATGGGCATGGAAACGAACTATTTTCTTTATGCTGCGATCATAAGGGTGAGCTTGTTGCTTCTTCATGTAAGGCCCAGTCTGCAGCTGTTGCAGAGGTATGGCTTTGGCAGGTCGGTTCATGGAAAGCAGTTGGCCGCTTGCAATCCCACAGCTTAACAGTAACACAGATGGAATTCTCACATGACGACAACTTTCTTTTGACTGTCTCAAGGGATCGCCAGTTCTCTGTTTTTTCAATCACAAGAACAGGCTCCGTTGAAATTAATTATAGCCTTCTTGCGAGGCAAGAGGGGCACAAGCGGATTATCTGGTCATGTTCTTGGAATCCACATGGTTATGAATTCGCAACAGGCTCACGGGATAAGACGGTGAAAATCTGGGCCGTTGAAAAGGATTCATCCATCAAACAGCTTATGACTTTGCCTCAATTTATGAGTAGTGTGACAGCATTGTCTTGGGTTGGTCTCCATCATCAAAGGAATAATGGAATTCTAGCTATTGGAATGGAAAATGGGCAAATAGAATTGTGGAATCTGTCTTGTAACAGAGCAGATGATGGGAGCATAGCACCACCAGGTTTGGCTGCCACTCTTGCTATACGTATAGATCCTTTTATATGCCATGCCTCTACCGTAAACCGTTTAGCGTGGAAGAAAAATGAGGAAGATCACACGAGTATGCAACTTGCTTCTTGCGGATCTGATAATTGTGTGAGAGTGTTCGAGTTAACGGTTTAG 2511 0.4273 MKMRGGEVEVKRVFIGAGCNRIVNNVSWGASGFVSFGAHNAVAIFCPKSAQIVTTLPGHKAAVNCTHWLPTSKFLFKAKQLKQHYLLSGDADGAIMLWEMSLADGKWRQVLQLPQLHKKGVTCISGIMVSQTEALFASTSSDCTVCVWELVFPINGSGDCKLSCLDSFTIGSKSMVALSLAELPGDGGQIVLAMGGLDNKIHLYCGGRTGKLVHACELKGHTDWIRSLDFSLPINVNGEVNNIFLVSSSQDKGIRIWKMALRSSMSNGNGICKKGEISLSSYIEGPVLLAGSSSFQISLESLLIGHEDWVYSVMWQPPSVSSIEGDAYYQPQSILSASMDKTMMIWQPEKISGVWMNVVTVGELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWKDVGNDNWLTQKVPSGHFAPVTDIAWARSGDYIISASHDQTTRIFAPWKIEASLQDGEFWHEISRPQVHGHDINCMAVIHGKGNHRFVSGADEKVARVFEAPLSFLKTLNNATLHKSCPSDDILGNVQILGANMSALGLSQKPIYVQAVHEIPERSEIDGIDTLETIPDAIPTVFTEPPIEDQLAWHTLWPESHKLYGHGNELFSLCCDHKGELVASSCKAQSAAVAEVWLWQVGSWKAVGRLQSHSLTVTQMEFSHDDNFLLTVSRDRQFSVFSITRTGSVEINYSLLARQEGHKRIIWSCSWNPHGYEFATGSRDKTVKIWAVEKDSSIKQLMTLPQFMSSVTALSWVGLHHQRNNGILAIGMENGQIELWNLSCNRADDGSIAPPGLAATLAIRIDPFICHASTVNRLAWKKNEEDHTSMQLASCGSDNCVRVFELTV 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01395 836 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 687 721 - -
Spst10g01395 836 Gene3D - 279 514 IPR015943 GO:0005515
Spst10g01395 836 ProSiteProfiles Trp-Asp (WD) repeats profile. 409 440 IPR001680 GO:0005515
Spst10g01395 836 SUPERFAMILY WD40 repeat-like 19 347 IPR036322 GO:0005515
Spst10g01395 836 ProSiteProfiles Trp-Asp (WD) repeats profile. 687 728 IPR001680 GO:0005515
Spst10g01395 836 ProSiteProfiles Trp-Asp (WD) repeats profile. 638 679 IPR001680 GO:0005515
Spst10g01395 836 Gene3D - 3 166 IPR015943 GO:0005515
Spst10g01395 836 Pfam WD domain, G-beta repeat 117 148 IPR001680 GO:0005515
Spst10g01395 836 Pfam WD domain, G-beta repeat 51 98 IPR001680 GO:0005515
Spst10g01395 836 Pfam WD domain, G-beta repeat 217 258 IPR001680 GO:0005515
Spst10g01395 836 Pfam WD domain, G-beta repeat 406 440 IPR001680 GO:0005515
Spst10g01395 836 Pfam WD domain, G-beta repeat 688 718 IPR001680 GO:0005515
Spst10g01395 836 PANTHER ELONGATOR COMPLEX PROTEIN 2 11 835 IPR037289 GO:0002098|GO:0033588
Spst10g01395 836 SMART WD40_4 296 347 IPR001680 GO:0005515
Spst10g01395 836 SMART WD40_4 49 99 IPR001680 GO:0005515
Spst10g01395 836 SMART WD40_4 725 769 IPR001680 GO:0005515
Spst10g01395 836 SMART WD40_4 209 258 IPR001680 GO:0005515
Spst10g01395 836 SMART WD40_4 680 719 IPR001680 GO:0005515
Spst10g01395 836 SMART WD40_4 584 628 IPR001680 GO:0005515
Spst10g01395 836 SMART WD40_4 106 149 IPR001680 GO:0005515
Spst10g01395 836 SMART WD40_4 451 495 IPR001680 GO:0005515
Spst10g01395 836 SMART WD40_4 401 441 IPR001680 GO:0005515
Spst10g01395 836 SMART WD40_4 357 396 IPR001680 GO:0005515
Spst10g01395 836 SMART WD40_4 789 833 IPR001680 GO:0005515
Spst10g01395 836 SMART WD40_4 631 670 IPR001680 GO:0005515
Spst10g01395 836 Gene3D - 681 836 IPR015943 GO:0005515
Spst10g01395 836 Gene3D - 577 680 IPR015943 GO:0005515
Spst10g01395 836 Gene3D - 167 278 IPR015943 GO:0005515
Spst10g01395 836 ProSiteProfiles Trp-Asp (WD) repeats profile. 218 267 IPR001680 GO:0005515
Spst10g01395 836 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 191 771 IPR011047 -
Spst10g01395 836 PRINTS G protein beta WD-40 repeat signature 245 259 IPR020472 -
Spst10g01395 836 PRINTS G protein beta WD-40 repeat signature 706 720 IPR020472 -
Spst10g01395 836 PRINTS G protein beta WD-40 repeat signature 86 100 IPR020472 -
Spst10g01395 836 FunFam Elongator acetyltransferase complex subunit 2 366 677 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01395 10 14439312 14451829 Spst10g01395 10 14439312 14451829 ECH