Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01394 ATGGAGGCGCAACCGCCAACCCCCTCTACTGCGCCGCCACCTCCGCCGCCGCACCTCAACTACCCCGACTCAGTTGAATCCTCGCCGCGCTCCCGAAATACTGACTCCTGGGACGAGCCCTTTGCGCCAGCGTCATCGAAACTCCGTCTGATGTGCAGCTACGGCGGACACATCGTCCCACGTCCTCACGACAAGTCCCTCTGCTACGTCGGCGGCGACACTCGCATAATCGTGGCGGAACGCGCCACCTCACTCACGGACCTCTCCACGCGCCTCTCCAAGACGTTTCTGAACGGACGCCCCTTCACGCTCAAGTACCAGCTCCCAAACGAGGACCTCGATTCCCTCATATCTGTCACCACCGATGAAGACCTCGAGAACATGATCGATGAGTATGACCGCACAGCAGCAGCCACCTCCGCTGTCAAACCCTCCCGCATCCGCCTCTTTCTCTTTCCCACCAAACCCGATTCTACTCACTCCATTCCCCCTCAAATCCTTGACACCTCAGCCAAATCAGACGATTGGTTCTTGAATGCCCTAAACGGCGCAGGGTTGCTTAACCGAGGGTTTTCCGAGTCTGCTTCTGTAAATTGCCTTCTCGGACTCGACGACGAAGTTGCTGGGAACAACCTCGAACCAGGTTCCAAGGACGTTGGGGAAGGTGGTGCTGGTGCTGGGGTTGGAGGTGGCGCTTCGCAGGGTGGATCTTTCGGCAACGGGAAAAATTTGAAGCAGGATGTTCACTCCGTTCCCGATTCGCCCATGCTCGAAACGACATCGTCGTTCGGGTCCACTTCGTCGTCACCGTCTCTCGCCAATTTGCCTCCGATTAGGGTTCATGTCGTGGAGGATCAGAAGGCGATGGGGATTGAAGAGCAGTTCGCGCAGATGGGGGTTGGTGTGGGGCAGAAGCAGCAGGATGAGGGTTTTGTTTTGCTGTCTTCGCCTCCGCCTCCGCCAGTCCCGGCTACCCTCGCCGCGGCAGGTGTGCCGATTGGGCCACCGACAATTGTCGCTGGGGATTATCACAACCGGGTTGTCTCCGATGATGAAAGATCCGATCATGGGGTTCCTGTTGGGTACAGAAAACCACCCACTCCTCAGCCACAGGTACAGTCACAGACACAAACACTTACTCCTCAATTTCAACAGAAGTCAACTGGTGGTAGTGGCGGCGTTGTTGATTTGCCTTCTCCCGATTCAGTTTCAAGTGATAGTAGTCTTGCGAATGCAATTTCTCGTCAGAAACCTGTTGTTTATCAGGAACAAGCTCAGGTTCAATCTGGAGCTACAAGGGTTCCGAGTAACCCTGTGGATCCGAAGCTCAATGTTTCTGATCCGCACGGTCGGATCCAGATGCAACAACATGTACAGGACCCTGGATTTTTGTTACAACAGCAATTTGAACAGCACCAGCAGTCGCAGCAGCTGCCACAACAGCAATTCGACCAGCACCAGCAGGGGCTGCCGCAACAGCAGCAACAGTTTATACATGGCACACATTTCATCCACCATAACCCTGCAATTTCTGCGTATTATCCTGTATATCCTTCCCAGCAACACCCTCAGCATCCACAACATCCACAGCTTTACTATGTGCATACGAGGCAGGCGCAGGCTTACAACCTGCCTGTACAGCAGTCTAATATGGGTGAGTCTGCGGGAAACCTTGCTTCTAGCCGACCACAAACTCCACCAAATCCTGCTACATTGGTTCCACAATCTGCTGCATACAATCCCATGAGAAATGCTCCCATGCCTAAAACTGAAATGAATGCTTACAGAGCTGCAACTGCCGGCACCCCTCAACTAGTTCAAGTTCCTACAAGCCAACATCAGCAACAGTATGTCACTTACTCACAGATTCACCATCCATCCCAGTCCATGGCTCCCAATTCTGCTCCACAGGCAAATTATGCTTTTGATTATCCGGACCCTGCACATGCCCAAATTTACTACTCTCAACCTTTGGCACCCACAATGTCTTCCCAGTACCAGACTATGACTGCTGCTGCTGTGATGATGCAGGAAGGTTCTGCTCAGCATCCCTCAGACAGTGTGAAGCAGCAGATAAGAACCTCACAGCCATTATAA 2097 0.5331 MEAQPPTPSTAPPPPPPHLNYPDSVESSPRSRNTDSWDEPFAPASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIIVAERATSLTDLSTRLSKTFLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTAAATSAVKPSRIRLFLFPTKPDSTHSIPPQILDTSAKSDDWFLNALNGAGLLNRGFSESASVNCLLGLDDEVAGNNLEPGSKDVGEGGAGAGVGGGASQGGSFGNGKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVEDQKAMGIEEQFAQMGVGVGQKQQDEGFVLLSSPPPPPVPATLAAAGVPIGPPTIVAGDYHNRVVSDDERSDHGVPVGYRKPPTPQPQVQSQTQTLTPQFQQKSTGGSGGVVDLPSPDSVSSDSSLANAISRQKPVVYQEQAQVQSGATRVPSNPVDPKLNVSDPHGRIQMQQHVQDPGFLLQQQFEQHQQSQQLPQQQFDQHQQGLPQQQQQFIHGTHFIHHNPAISAYYPVYPSQQHPQHPQHPQLYYVHTRQAQAYNLPVQQSNMGESAGNLASSRPQTPPNPATLVPQSAAYNPMRNAPMPKTEMNAYRAATAGTPQLVQVPTSQHQQQYVTYSQIHHPSQSMAPNSAPQANYAFDYPDPAHAQIYYSQPLAPTMSSQYQTMTAAAVMMQEGSAQHPSDSVKQQIRTSQPL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01394 698 MobiDBLite consensus disorder prediction 367 435 - -
Spst10g01394 698 MobiDBLite consensus disorder prediction 550 575 - -
Spst10g01394 698 Gene3D - 67 152 - -
Spst10g01394 698 MobiDBLite consensus disorder prediction 1 22 - -
Spst10g01394 698 MobiDBLite consensus disorder prediction 212 274 - -
Spst10g01394 698 MobiDBLite consensus disorder prediction 253 274 - -
Spst10g01394 698 MobiDBLite consensus disorder prediction 469 493 - -
Spst10g01394 698 ProSiteProfiles PB1 domain profile. 47 154 IPR000270 GO:0005515
Spst10g01394 698 SMART PB1_new 62 152 IPR000270 GO:0005515
Spst10g01394 698 Pfam PB1 domain 63 153 IPR000270 GO:0005515
Spst10g01394 698 SUPERFAMILY CAD & PB1 domains 63 162 - -
Spst10g01394 698 MobiDBLite consensus disorder prediction 676 698 - -
Spst10g01394 698 CDD PB1_UP2 51 152 - -
Spst10g01394 698 MobiDBLite consensus disorder prediction 349 439 - -
Spst10g01394 698 PANTHER OS05G0427100 PROTEIN-RELATED 20 513 - -
Spst10g01394 698 MobiDBLite consensus disorder prediction 24 40 - -
Spst10g01394 698 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01394 Spst-Chr10 14434131 14436441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01394 44 263 MAP Kinase Kinase Kinase AT1G79570 34.071 1.12e-24 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01394 10 14434131 14436441 Spst10g01394 10 14434131 14436441 ECH
Spst10g01394 10 14434131 14436441 Spst4g02795 4 67656562 67658752 ECH