Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01393 ATGAGGCAGCAGGTTGATCCCTCGGCTCATACTATCAAATCCCATGGAGCCGCACTTGCAAGAAATCACGCTCGCGATTGGCTTGTTTTGTTACTTCTCATAGTTATAGACGTTGTCCTTTTTGTCATTAATCCATTTTATCGCTTTGTGGGAAGGGACATGATGGAAGACCTTAAATATCCTTTGAAAGAAAACACGGTGCCCATTTGGGCTGTTCCTTTATATGCGGTTCTGTTGCCAATGGCCGTTTTCCTTCTCTTTTATATGCGCAGGAGAGATGTATATGATTTACACCACAGTGTTCTAGGTTTGTTATTTGCTGTTCTGATCACTGGAGTCTTAACCGATTCAATAAAAAATGCAGTTGGCCGGCCTCGGCCAGACTTCTTTTGGCGTTGCTTCCCCGACGGAGTGGAGAATTATGATAAATGGGGAGGTGTGGTATGTCATGGCAAGCAGAGCGATATAAAAGAAGGACACAAGAGTTTCCCAAGCGGTCATACATCATGGTCCTTTGCGGGTCTTGGTTTTCTCTCTCTGTACCTATCGGGAAAGATTAAAGCTTTTGATCACAAAGGGCACGTCGCAAAATTATGCATTGTTTTTCTTCCTCTTCTTCTTGCTTGCCTGGTTGGAATCTCTCGCGTGGATGACTATTGGCATCATTGGCAAGATGTGTTTGCTGGAGGACTTATAGGGCTAGTTGTGGCAACCTTTTGCTATATGCAGTTCTTCCCTGCTCCCTGCAGCAACCACGGATGGGGTCCACATGCATATTTCCGGGCAATGGAAGAATCACGAGGCAATGCAAACACGAGCAGGGACTCACCCGTTGTGCAGGCCATGGAGGAAGGGGTTACGAATGAAGAACCAAGGAGAAACGGTGTTCGGAGACACCAAGCCTCGTTCGTTCCATTTTCAATTTCAGCCTTCTTGCTTTCTCCTTCCACTGCCTCGAATCTCGTGCACGTCCAGTTGCAGAAAAAAATGCCAGAAATTCAGTTGGGTATGCATACTATCAGATCACATGGAACAAGAGTGGCAAGGATACATATGCACGACTGGTTGATTCTTTTGCTTCTTGTGATCATCGACGCTGTCTTGAATATAATAGAGCCATTTCACCGTTTCGTTGGAGAAGGGATGATGACAGACCTTAGATACCCATTGAAAGATAATACTATTCCCTTCTGGGCTGTTCCGATAATAGCGATACTGTTACCACTGGCTGTTTTTCTCGTTTACTATTTCATTCGAAAGGATGTCTATGACTTCCACCATGCTATATTGGGCCTTCTATTTTCTGTACTCATTACTGCGGTGATAACTGATGCTATCAAGGATGGTGTTGGACGGCCAAGGCCAGATTTCTTCTGGCGTTGTTTCCCAGATGGAAAAGGGGTGTTTGATCCAGTAACAAGCAATGTTCAGTGTACTGGAGATAAGGGTGTTATTAAGGAAGGACATAAAAGTTTCCCCAGTGGACATACCTCTTGGTCCTTTGCTGGTCTTGTTTATCTTTCCTGGTATCTATCTGGCAAAATTAGAGTATTTGACCGCAGGGGCCATATTGCAAAGCTGTGTCTTGTTTTCTTACCAATCCTCGTGGCAGCTATGATTGCTGTCTCTCGTGTTGATGATTATTGGCATCATTGGCAAGATGTGTTTGCTGGAGGTCTTATAGGGACGACAATTGCTTCCTTTTGTTACTTACAATTCTATCCACCTCCTTACGACCTAGATGGTTGGGGACCTCATGCATATTTCCAGATGTTAGCTGAATCTCGTAATGGTGCTCAGCCCCCTACCGTGAATAATGATATTCATCATGTGCAATCTGCTGAGCTTCAGGCTGTATCTTTGTACATCCCACCTCAACATGATGCAGATACACGAGGCAATAGCTGGGATTCAAGCCCCATGTTAGGTGCATCCCAAAATGTCAGAACAAATTGA 1956 0.4468 MRQQVDPSAHTIKSHGAALARNHARDWLVLLLLIVIDVVLFVINPFYRFVGRDMMEDLKYPLKENTVPIWAVPLYAVLLPMAVFLLFYMRRRDVYDLHHSVLGLLFAVLITGVLTDSIKNAVGRPRPDFFWRCFPDGVENYDKWGGVVCHGKQSDIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDHKGHVAKLCIVFLPLLLACLVGISRVDDYWHHWQDVFAGGLIGLVVATFCYMQFFPAPCSNHGWGPHAYFRAMEESRGNANTSRDSPVVQAMEEGVTNEEPRRNGVRRHQASFVPFSISAFLLSPSTASNLVHVQLQKKMPEIQLGMHTIRSHGTRVARIHMHDWLILLLLVIIDAVLNIIEPFHRFVGEGMMTDLRYPLKDNTIPFWAVPIIAILLPLAVFLVYYFIRKDVYDFHHAILGLLFSVLITAVITDAIKDGVGRPRPDFFWRCFPDGKGVFDPVTSNVQCTGDKGVIKEGHKSFPSGHTSWSFAGLVYLSWYLSGKIRVFDRRGHIAKLCLVFLPILVAAMIAVSRVDDYWHHWQDVFAGGLIGTTIASFCYLQFYPPPYDLDGWGPHAYFQMLAESRNGAQPPTVNNDIHHVQSAELQAVSLYIPPQHDADTRGNSWDSSPMLGASQNVRTN 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01393 651 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 350 578 IPR036938 -
Spst10g01393 651 CDD PAP2_containing_1_like 58 244 - -
Spst10g01393 651 FunFam Lipid phosphate phosphatase 2 349 581 - -
Spst10g01393 651 FunFam Lipid phosphate phosphatase 2 21 252 - -
Spst10g01393 651 SMART acid_phosph_2 101 241 IPR000326 -
Spst10g01393 651 SMART acid_phosph_2 427 570 IPR000326 -
Spst10g01393 651 MobiDBLite consensus disorder prediction 629 651 - -
Spst10g01393 651 Pfam PAP2 superfamily 429 573 IPR000326 -
Spst10g01393 651 Pfam PAP2 superfamily 101 245 IPR000326 -
Spst10g01393 651 CDD PAP2_containing_1_like 384 573 - -
Spst10g01393 651 PANTHER LIPID PHOSPHATE PHOSPHATASE 341 608 IPR043216 GO:0006644
Spst10g01393 651 MobiDBLite consensus disorder prediction 631 651 - -
Spst10g01393 651 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 22 248 IPR036938 -
Spst10g01393 651 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 348 579 - -
Spst10g01393 651 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 22 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01393 Spst-Chr10 14405692 14421601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01393 330 619 Lipid Metabolism Gene Families AT1G15080 76.552 6.03e-156 449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01393 10 14405692 14421601 Spst10g01393 10 14405692 14421601 ECH