Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01390 ATGGGTAGTGCGAGTGCCCGATCTCATTCTCATGCGCTTGCAGAAGGATACGTTCCACTTGATTCCAGCCATGTCCGTCTTCAAGAACTCGGTTACAAGCAAGAACTCAAGCGTGACCTTTCGGTGATTTCGAATTTTGCGTTTTCGTTTTCTATTATTTCGGTGCTGACCGGAGTCACTACTCTTTACAACATCGGATTGAACTATGGTGGCACTGTTTCCTTCGTTTATGGCTGGTTTATTGTCTCTGCTTTCACCATGACTGTTGCGCTTTCAATGGCTGAGATCTGCTCCTCCTATCCGACTTCCGGTGGGCTTTACTATTGGAGCGCTAAGCTTGCTGGACCCAGATGGGCTCCTTTTGCTTCCTGGATCACTGGCTGGTTCAATATTGTTGGTCAGTGGGCAATGACAACAAGTGTAGATTTTTCACTTGCACTACTAATTCAAGTTATTATTCTCCTTAGTACCGGTGGGAAAAATGGTGGCGGATATGAGGCTTCCAAATATGTAGTTATTGCTTTCCATGCGGTAATTTTGCTCTTACACGGCATAATAAACAGCCTTCCTATCTCGTTGTTATCATTTTTGGGACAACTGGCAGCTATTTGGAATGTTTTAGGTGTTTTTGTGCTTATGATTGTTATTCCATCTGTTGCCACGGAAAGGGCTAGTGCAAAGTTTGTTTTTACTCATTTCAATACTGAAAATGGGGATGGAATAAGCAACAGGCTCTACATATTTCTCTTGGGATTTCTAATGAGTCAGTATACCCTAGTTGGATTTGACGCATCGGCTTATATGACAGAGGAAACCAGAGATGCTGACATAAATGGACCAAAAGGAATTATCAGTGCTGTTGGGATATCTGTTATAGTTGGATGGGGTTACATACTAGGCATTACTTTTGCAGTCTCTGACATCCCTTACCTTTTGAGTGAAGATAATGACGCTGGTGGGTATGCTATTGCTGAAGTGTTTTATCTTGCATTCAAGAAAAGATATGGCCATGGAACTGGGGGTATTATTTGCTTAGTAATTGTTGCTGTTGCAATATTTTTCTGTGGCATGAGTTCAGTTACCAGCAATTCAAGGATGGTTTATGCTTTCTCTAGAGATGGGGCCATGCCAATATCATCATTGTGGCACAAAGTTAACAGGCAAGAGGTTCCCATCTATGCAGTTTGGCTTTCCGTTTCTATATCATTCAGCATGGCCTTAACGTCTCTTGGAAGCATAGTGGCATTTGAGGCCATGGTATCCATTGCAACGATTGGCCTCTATATTGCTTATGCCTTACCTATATTCTTTAGGGTGACCCTGGCACAGAAGGATTTTGTCCCTGGGCCTTTCAACTTGGGCCGGTACGGAGTGATTGTGGGCTGGGTTGCTGTTCTTTGGGTGCTGATCATTTCCATACTTTTCTCATTGCCTGTTTCCTACCCAATAACAATAGAAACACTTAACTACACTCCTGTTGCTTTTGGATGTTTGCTTATTCTTGTAGTTTCTTTCTGGTTAATCAGTGGTCGGCGTTGGTTTAAAGGCCCTGTAACCAATATATAA 1566 0.4266 MGSASARSHSHALAEGYVPLDSSHVRLQELGYKQELKRDLSVISNFAFSFSIISVLTGVTTLYNIGLNYGGTVSFVYGWFIVSAFTMTVALSMAEICSSYPTSGGLYYWSAKLAGPRWAPFASWITGWFNIVGQWAMTTSVDFSLALLIQVIILLSTGGKNGGGYEASKYVVIAFHAVILLLHGIINSLPISLLSFLGQLAAIWNVLGVFVLMIVIPSVATERASAKFVFTHFNTENGDGISNRLYIFLLGFLMSQYTLVGFDASAYMTEETRDADINGPKGIISAVGISVIVGWGYILGITFAVSDIPYLLSEDNDAGGYAIAEVFYLAFKKRYGHGTGGIICLVIVAVAIFFCGMSSVTSNSRMVYAFSRDGAMPISSLWHKVNRQEVPIYAVWLSVSISFSMALTSLGSIVAFEAMVSIATIGLYIAYALPIFFRVTLAQKDFVPGPFNLGRYGVIVGWVAVLWVLIISILFSLPVSYPITIETLNYTPVAFGCLLILVVSFWLISGRRWFKGPVTNI 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01390 521 PIRSF AA_transporter 26 518 - -
Spst10g01390 521 Pfam Amino acid permease 40 495 IPR002293 GO:0016020|GO:0022857|GO:0055085
Spst10g01390 521 PANTHER AMINO-ACID PERMEASE BAT1 17 521 - -
Spst10g01390 521 FunFam Amino-acid permease BAT1 34 513 - -
Spst10g01390 521 Gene3D Amino acid/polyamine transporter I 34 514 - -
Spst10g01390 521 NCBIfam amino acid permease 27 517 IPR004756 GO:0006865|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01390 Spst-Chr10 14379390 14389834 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01390 87 521 Organic Solute Cotransporters AT2G01170 75.172 0.0 640
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01390 10 14379390 14389834 Spst10g01390 10 14379390 14389834 ECH