Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01387 ATGGAGAAGGTTTGTGAATTCTGCACGGCCCTGAGGCCACTTGTTTACTGTAAGGCTGATGCAGCATATCTTTGTCTATCCTGTGATGCCAAGGTGCATTTGGCAAATGCTTTGTCTGGCCGGCACCTCCGGAACCTTGTGTGTAATTCATGTGGACACCATGTTGCTTATGTTTTATGTTTGGACCACAAAATGTTAATCTGTCGAGACTGTGATCAAAAGTTGCACAATGTTTCTTTACCACATCAGAAACGAGCTATCAGAAGTTTCATCGGTTGCCCTTCTGCTAAAGACTTTGCCTCACTCTGGGGATTTGAATTGAATGAGATTGAAAACAGTGCCAGTCAGGATCAGTTTGATTCAGTTTCATGTGTTTCTGCCGATTTGAATGTTGCACAAGTCTCAGGAAAGCCTAATATTCAAACTGGGGTCCCTTCACTGCTATCTGGGGCCAAACTTGATGATGGATCGACCAGTCAACAAGGTCAGATATTGTACAATCATCAAGAGCGTCAAACTATTGTGCAGCAGATTATTGATCTAAAATGGCTTCAACAAAACGAGGAGATGGATTATTCTGCGAAGATCAATAAGCCAAAAGAAAAAAAATTATCTCCTTCAGTATATCACACTCTTAAGAAATTGGACGAAAAGTTCAATGGGCAAGCACAAAATTCCCAGGATCTTGCAACTAATGTTCTGGAAAAAGACTGTCCTATTGTGGAGCTGAATACTGAGACTTTACCTTCTACTTTTTCTCAACTTGATAATTTATCTTCGTCATCAACTATCGATCTTCCATTGCATGGAGAATTGTTCTGGGCATGCAAAAGTCCACTTCGAAGTAATCAGTTGTGGTCCCAAAATATCCAAGACCTCGGGATATGTGAAGAACTTGTCTGTCTAGATGATTTTAACATCCCTGATGTTGACTTAACTTTCCAAAACTTTGATGAACTATTTGGTGGAGATCAAGATCCAATTAGAATACTCTTTGATGATCAAGATGTATCCTGCTCTTCTTTGGAGAAGGATAAGTCAGTCGACAAGTCAGATATTGACAATCCAAGTGCAATGGAGGTTGCAAAGGATTCTTTAGCAGCTGCATCCGTTACTATCTCCCAATCTGATCATGAGAACAAGGATATGAATCCTCTCAGCCCGTACTGTCCAAAAAGCATGGATCCTACGCGTGCAATTCAACCATTTGATTCAACTATTCCACTATCTGTTTTGAGATTCAGTCCGCAAAGCAGTATCACTGGCCATGAGGACAGTGCCCTTTCTCCCTACAGTGAAGGGAAGGCTTATTCAGGCATTAGAAGCAATTTGGACTTCTATCCAGGAAACCTGGAGCTAAAATCTAGGGACTTGTTTTGGTTTCTCTTGATAGTTAAGTTGAGTCAACCCCTTTGGATTTTTCTTGACATTTGA 1434 0.4086 MEKVCEFCTALRPLVYCKADAAYLCLSCDAKVHLANALSGRHLRNLVCNSCGHHVAYVLCLDHKMLICRDCDQKLHNVSLPHQKRAIRSFIGCPSAKDFASLWGFELNEIENSASQDQFDSVSCVSADLNVAQVSGKPNIQTGVPSLLSGAKLDDGSTSQQGQILYNHQERQTIVQQIIDLKWLQQNEEMDYSAKINKPKEKKLSPSVYHTLKKLDEKFNGQAQNSQDLATNVLEKDCPIVELNTETLPSTFSQLDNLSSSSTIDLPLHGELFWACKSPLRSNQLWSQNIQDLGICEELVCLDDFNIPDVDLTFQNFDELFGGDQDPIRILFDDQDVSCSSLEKDKSVDKSDIDNPSAMEVAKDSLAAASVTISQSDHENKDMNPLSPYCPKSMDPTRAIQPFDSTIPLSVLRFSPQSSITGHEDSALSPYSEGKAYSGIRSNLDFYPGNLELKSRDLFWFLLIVKLSQPLWIFLDI 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01387 477 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 393 - -
Spst10g01387 477 CDD Bbox1_BBX-like 4 44 - -
Spst10g01387 477 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Spst10g01387 477 SMART bboxneu5 1 47 IPR000315 GO:0008270
Spst10g01387 477 SMART bboxneu5 48 87 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01387 Spst-Chr10 14351316 14357315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01387 1 328 C2C2-CO-like Transcription Factor Family AT1G68190 38.554 1.18e-65 214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01387 10 14351316 14357315 Spst10g01387 10 14351316 14357315 ECH