Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01379 ATGCTTGTTGTTGCAACTGATGTTTGCCCCACAGCCACAGCCACCTCCGATGGACAAGTGGCAGCGAGAGTGATGAATTTGAGTTTCGATGGGCTCTGCATAAGCCCCAAGCGAGATCACAAGTCCGAAAACTATGAGTACCTTCAATTGGAGTTCAATGCTCACGTGTTTGGCTCACTGGAGCAGTATTTGCCTCCTCACAAATTTGAGGTTGAGGTTCGGTACATGAGGAACATTCTGCTTCGCTATTTTACTGAGAATGACCGCATTCGGATTCAGAAGCTGAGGGAGTACAGGCTAAAGGTCATATTGAACTATCCTCCACTGCATAGGGAGATATATACTATGGATGCTGAGAACTTTTTCACGCCATCATTTCTCAGAGCAATTAAAGAAAACACCGAAGCAAGTTTTAGAAGTATAATGGCTGAACCTCGAAAAGGAATTTATACTTTTGAAATGCTTCAACCACAATTTTGTAAAAAACTGATGTCTGAGGTGGATAGTTTTGAAAGATGGGTTCGTGGTACCAAACTAAGAATCATGCGACCTAATGCAATGAATAAACATGGTGTTGTTCTTGATGATTTTGGCCTGGAAATCATGCTTGACAGATTTTTGAGTGACTTCATACATCCTATGTCACGAGTTTTCTACCGTGAATTTGGTGGATCCTCGGTGGACTCTCACCATGGTTTTGTTGTTGAATATGGAATCAATAAAGACGTGGAACTTGGCTTACATGTAGATGACGCAGAAGTCTCCTTAAATGTTTGCTTGGGGAAAGAATTTTCTGGCGGAGAAGTATTCTTCCAGGGTGTTCGATGTGAAGAACATTTACTTTCAAATGCCCAACCAGGTGCATTAATGGAAAAATTTGAGATCTTCAATTATTTCCATGCTCCGGGACACGTGATTCTTCATCCTGGTCGTCAACGGCATGGGGCCAGACCAACAATATCTGGGAATAGGACGAATTTAATCATATGGTGTAGAAGTACGGCTTTCAGAGAGTTGAAGAAATATCAGAGAGATTTTCCAAGCTGGTGTGGGGAATGCAAACGCAAGAAGAAGGAGCGAGCGCGTTTATCGCTGATGGTCATCCAACAGGAATTACGGAAGAGGGAGATATAA 1134 0.425 MLVVATDVCPTATATSDGQVAARVMNLSFDGLCISPKRDHKSENYEYLQLEFNAHVFGSLEQYLPPHKFEVEVRYMRNILLRYFTENDRIRIQKLREYRLKVILNYPPLHREIYTMDAENFFTPSFLRAIKENTEASFRSIMAEPRKGIYTFEMLQPQFCKKLMSEVDSFERWVRGTKLRIMRPNAMNKHGVVLDDFGLEIMLDRFLSDFIHPMSRVFYREFGGSSVDSHHGFVVEYGINKDVELGLHVDDAEVSLNVCLGKEFSGGEVFFQGVRCEEHLLSNAQPGALMEKFEIFNYFHAPGHVILHPGRQRHGARPTISGNRTNLIIWCRSTAFRELKKYQRDFPSWCGECKRKKKERARLSLMVIQQELRKREI 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01379 377 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 228 333 IPR005123 -
Spst10g01379 377 Gene3D q2cbj1_9rhob like domain 144 333 - -
Spst10g01379 377 SMART p4hc 147 332 IPR006620 GO:0005506|GO:0016705|GO:0031418
Spst10g01379 377 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 36 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01379 Spst-Chr10 14225647 14234304 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01379 10 14225647 14234304 Spst10g01379 10 14225647 14234304 ECH