Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01377 ATGGCCATGGCTTCTGCAAAACTTAATACTTTGTCTTCGCATTGGATCGCCCACACCACCTTCTCTCCTCGCAGTCGATCCTCTCCTCGCCGTGTCTCTCTCCCGATCCGCGCCTCTTACGAAAATGAACTCGTCCAAACCGCCAAATCTATTGCAACTCCTGGGCGTGGAATTCTTGCAATTGATGAATCAAATGCAACATGTGGGAAGCGTTTAGCATCCATTGGTTTGGACAATACTGAGGTGAATCGCCAGGCCTACAGGCAACTTCTGCTCACCACACCTGGCCTTGGTGAGTATATTTCTGGTGCCATTCTTTTTGAAGAAACCCTTTACCAGTCAACCACTGATGGAAAAAAATTCGTGGACTGCCTCCGTGATGAGAACATTGTTCCTGGCATCAAAGTTGATAAGGGTCTGGTCCCCCTGCCGGGGTCAAACAATGAATCATGGTGCCAAGGGTTAGATGGATTGGCTTCTAGATCTGCTGAATACTACAAGCAAGGTGCTCGATTTGCCAAGTGGAGGACAGTTGTTAGTATTCCATGTGGTCCTTCTGCATTAGCTGTTAAGGAAGCAGCGTGGGGACTTGCACGTTATGCAGCTATCTCTCAGGACAATGGTCTTGTGCCAATCGTAGAGCCTGAAATTCTTCTTGACGGAGATCACCCAATTGAGAGGACATTGGAAGTGGCCGAGAAAGTCTGGTCAGAAGTCTTCTTCTATTTGGCTGAAAACAATGTCATTTTTGAGGGAATTTTGCTCAAACCTAGCATGGTTACACCTGGGGCTGAACACAAGGAGAAGGCTTCTCCGGAAACCATTGCCAAATATACTCTGACCATGCTTAGAAGAAGAGTTCCTCCTGCAGTCCCTGGAATCATGTTTTTGTCTGGTGGACAATCTGAAGTGGAAGCCACACTAAATCTTAATGCAATGAACCAAAGCCCCAACCCTTGGCATGTTTCTTTCTCGTATGCACGAGCTCTTCAGAACACCGTGCTTAAGACATGGCAAGGACACCCTGAGAATGTGGAAGCTGCTCAAAAGTCTCTTTTGGTGCGCGCTAAAGCAAATTCCTTGGCTCAACTTGGAAGATATTCTGCGGAGGGTGAGAGTGAAGAGGCAAAGAAGGGAATGTTTGTCAAGGGATATACCTACTAA 1164 0.4708 MAMASAKLNTLSSHWIAHTTFSPRSRSSPRRVSLPIRASYENELVQTAKSIATPGRGILAIDESNATCGKRLASIGLDNTEVNRQAYRQLLLTTPGLGEYISGAILFEETLYQSTTDGKKFVDCLRDENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVIFEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTVLKTWQGHPENVEAAQKSLLVRAKANSLAQLGRYSAEGESEEAKKGMFVKGYTY 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01377 387 CDD FBP_aldolase_I_a 41 367 - -
Spst10g01377 387 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 248 258 IPR029768 -
Spst10g01377 387 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 38 387 IPR000741 GO:0004332|GO:0006096
Spst10g01377 387 Pfam Fructose-bisphosphate aldolase class-I 43 387 IPR000741 GO:0004332|GO:0006096
Spst10g01377 387 Gene3D Aldolase class I 29 386 IPR013785 -
Spst10g01377 387 NCBIfam fructose-bisphosphate aldolase class I 43 363 - -
Spst10g01377 387 SUPERFAMILY Aldolase 37 387 - -
Spst10g01377 387 FunFam Fructose-bisphosphate aldolase 26 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01377 Spst-Chr10 14215969 14218284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01377 38 387 Miscellaneous Gene Families AT3G52930 54.802 4.63e-132 381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01377 10 14215969 14218284 Spst10g01377 10 14215969 14218284 ECH