Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01373 ATGGTTGCCACTTTGTCATGTCCAGCCTCTACCTACTTTGTAAGGTCTTGTTACATGAGAGAAAACCATGACCAACTTAAGCAGCAAGTGACCGGCATCAGAACTAATGGGAGTTTTAGGTCCCCAGTTAAAGTCGAGACACTAAGCCAAACAGTTTCAACTTCTACCACCACTCTTGGTCAAGCCGTTACAATTGGTGAAAATGGTCTGCGCCAAAACATCCCAACAAAGAAGCAGTTGGTTGATCCTCATCGTCAAGGGCTCATCATTGAAGGTGGAGTTGGTTATAGACAGACTGTTGTCATTAGGTCCTATGAAGTTGGAGCTGATAAAACTGCCACACTTGAGAGCATCCTCAATCTTCTTCAGGAAACAGCATTAAACCATGTTTGGATGTCTGGACTGCTCAGTGATGGGTTTGGGGCTACACATGGAATGGTGAGGAACGATCTCATTTGGGTTGTCTCAAGAATGCAAGTTCTGATTGATTACTATCCCATCTGGGGAGAGGTAGTTGAAATTGACACATGGGTTGGAGCATCAGGCAAGAATGGAATGCGGCGGGACTGGCTGATAAGAAGCAAAGCCACAGGCCACATTTTTGGACGTGCAACAAGCACGTGGGTGATGATGAACCGCAAAACAAGGCGTCTCTCCAAAATGCCAGAAGAGGTGAGAGCAGAAGTTGCACCTTGGTTTATAGAGAAGCAAGCAATAAAGGAAGATACTCATGAAAAAATAGTCAAATTGGATAAAGAGGCAAAATACATGAATTCAGATTTGAAGCCCAAGAGAAGTGATTTGGACATGAACCAACATGTTAATAATGTGAAGTATGTAAGATGGATGTTAGAGACCATCCCAGACCAAATTCTGGAGGGGCATCAATTATCTGGTATCACACTAGAGTACAGAAGGGAGTGTGGAAGCTTAGATATAGTTCAATCATTATGTGAACCTGAAGATGATGAAATACTTGATGGTGTGGTAGAACCAGATTACTGCACAAATCTTCTGAATGGGTTATCAGCAGATATTCTAAATGGTGGTGGAGTGCTGACTTGCCTTGAGCAGAGCTCATTGAGGTATACACACCTTCTACAAATCAAAGGAGAGAAACAAAACGACGAAATTGTGAGAGGAAGGACTGCATGGAAGAGGAAGATTGTTACAATACCATTTTCCACTTAG 1191 0.4291 MVATLSCPASTYFVRSCYMRENHDQLKQQVTGIRTNGSFRSPVKVETLSQTVSTSTTTLGQAVTIGENGLRQNIPTKKQLVDPHRQGLIIEGGVGYRQTVVIRSYEVGADKTATLESILNLLQETALNHVWMSGLLSDGFGATHGMVRNDLIWVVSRMQVLIDYYPIWGEVVEIDTWVGASGKNGMRRDWLIRSKATGHIFGRATSTWVMMNRKTRRLSKMPEEVRAEVAPWFIEKQAIKEDTHEKIVKLDKEAKYMNSDLKPKRSDLDMNQHVNNVKYVRWMLETIPDQILEGHQLSGITLEYRRECGSLDIVQSLCEPEDDEILDGVVEPDYCTNLLNGLSADILNGGGVLTCLEQSSLRYTHLLQIKGEKQNDEIVRGRTAWKRKIVTIPFST 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01373 396 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 24 389 IPR045023 GO:0006633|GO:0016297
Spst10g01373 396 Gene3D Hotdog Thioesterase 89 392 - -
Spst10g01373 396 Pfam Acyl-ACP thioesterase 95 386 IPR002864 GO:0006633|GO:0016790
Spst10g01373 396 CDD 4HBT 96 212 - -
Spst10g01373 396 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 256 393 IPR029069 -
Spst10g01373 396 FunFam Acyl-[acyl-carrier-protein] hydrolase 87 391 - -
Spst10g01373 396 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 95 242 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01373 Spst-Chr10 14172822 14174987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01373 80 396 Acyl Lipid Metabolism Gene Families AT1G08510 48.113 3.85e-99 299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01373 10 14172822 14174987 Spst10g01373 10 14172822 14174987 ECH