Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01372 ATGGAGCCAGAGAATCACAAGACGAAGGCAGTGAACGTGCTTCGAAGTAGAATCTGCGACCCCAAATTCATCTTCAATAACGATAATCCAGACAGTAACTACAGCAAACTGAAATTCATGATATCGAGTTCGGTGACGGAGGCGTGCAACAATTCTATTCTGCTTCTCGGTCCCCGTGGCTCCGGAAAGAATGCGGTTTTGGAACTTGTCATTCAAGATTTGCTGCAAGAGTATCCAGACTCGATTTCAGTGATAAGGTTGAATGGGCTTTTACACAGTGATGACATCTCTGCATTCAAGGAGATAGCTAGGCAGTTATGCATGGAGCATCAATTGCTATTCTCAAAAGCGGCATCATTTGATGACAACTCCCAGTTTATGGTTGCCATTCTAAAGGAATGCGGATTAGCACATAAAACAGTAATTTTTGTTCTGGATGAGTTTGACCTGTTTGCTCAGGGTAAACAGCGATTACTTTATAGCTTGCTAGATGCAATGCAATCAATAGCATCACAGGCTGTTGTACTTGGCATTAGCTGCCGTCTGGATGCAGATCAATTGTTGGAGAAAAGAGTACGATCTCGGTTTTCACATAGAAAGCTTTTGTTCTTACCACCTTCAATGGAAGATTCGCAGAAGTTACTGATGCATATGCTGACATTACCAATCGATTCAAGCTTTCCACATGATTATGCTGTTGAGTTTAACAGTAAGGTCCAAAATATTATAGAAGATAGAAAGTTCAAAGAAACCCTCGAAAGATATTTAAATGTTGATTCCTGTGTCAAACATTTGCTGAGGTTCCTATTCTGTGCAGTCTCTCACATGGATTTGCAGACTGGGTTCCTGTGTCAGGAGAACTTTGAAATTGCATTTTCAAGTATCCAGAGGCAACCTAAACTGGAATGTTTAAGAAATTGTTCCAATTTAGAACTTCATATTTTGGTTTGCATGAAGAGATTGGAAGTTAAAGAGCAAAGTTTATGCAACTTCAATTCTGTAATGAAAGAGTATAAAAGTATGCATGACTCCTTCCGGACTTCTGAATATTATTCGAGAAATGTCTGCTTAAGGGCATTTGAACACCTTATGCATCGTGAGATGATATGCTTCACAGACAATAGAGGACAGAGTTTGTCTATTGAATTTCGACCTGTGAAGCTTTTAATTTCATCTGCTGAACTATATCAGGGACTTAGAGCGTATAATTCATGCCCTGCTTACCTTCTAAAGTTAATGGATCGTGAAGGCTAA 1254 0.3963 MEPENHKTKAVNVLRSRICDPKFIFNNDNPDSNYSKLKFMISSSVTEACNNSILLLGPRGSGKNAVLELVIQDLLQEYPDSISVIRLNGLLHSDDISAFKEIARQLCMEHQLLFSKAASFDDNSQFMVAILKECGLAHKTVIFVLDEFDLFAQGKQRLLYSLLDAMQSIASQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSMEDSQKLLMHMLTLPIDSSFPHDYAVEFNSKVQNIIEDRKFKETLERYLNVDSCVKHLLRFLFCAVSHMDLQTGFLCQENFEIAFSSIQRQPKLECLRNCSNLELHILVCMKRLEVKEQSLCNFNSVMKEYKSMHDSFRTSEYYSRNVCLRAFEHLMHREMICFTDNRGQSLSIEFRPVKLLISSAELYQGLRAYNSCPAYLLKLMDREG 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01372 417 PIRSF ORC4 3 417 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Spst10g01372 417 Gene3D - 30 205 IPR027417 -
Spst10g01372 417 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 214 397 IPR032705 -
Spst10g01372 417 Pfam AAA ATPase domain 35 168 IPR041664 -
Spst10g01372 417 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 8 416 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Spst10g01372 417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 255 IPR027417 -
Spst10g01372 417 FunFam Origin of replication complex subunit 4 31 205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01372 1 414 Core DNA Replication Machinery Family AT2G01120 64.303 0.0 560
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01372 10 14164627 14169265 Spst10g01372 10 14164627 14169265 ECH