Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01371 ATGGGATTGGTAACCACCACCGTTCCCATGAACGTTGTTCCTCAATTTGGGTCGCTCCGAACATCCATTCGGGTCGGAAACTCCTCAGGCTTGAGCTTCCCTCAATCACGGTCACAGAAGAGGAATAAGAGCTTTGTTTGCTTCGCTGTGGATGACGACCTCAGACCGAAGCAACATGACTTGAGTACTACAGCTACTGGGTTGGGCTCCGCCCTTGAAGAAAGACCCGAAAACACAGATCTTTTTGAGAGTAAATCGGAAGAAATGCAAGGAAATTTTGAGCAAGATGGTGGACGAGGTGCTATATATGATTTTCTTTATCCTAGTAAAGAGCTTCTTCCTGATGATAAAGAAATGAGTATATTTGATCATCTTGAAGAGCTGCGGCAGAGAATCTTTGTATCAGTTTTAGCAGTTGGAGCTAGCATTTTAGGATGCTTCGCATTTTCAAAAGAACTGATAATGGTTCTGGAAGCTCCTGTTAAATCACAGGGTGTAAGATTTCTCCAGCTGGCTCCTGGTGAATTTTTCTTTACAACTTTAAAGGTGTCTGGATACTGTGGCCTTCTCTTGGGAAGTCCCATCATCCTCTATGAAATCATAGCCTTTATACTTCCAGGACTTACAAAAGCCGAAAGAAGATTTCTTGGGCCAATTGTTTTAGGCTCATCAGTTCTTTTCTATGCCGGAATAACTTTCTCCTACTTGGTTCTGACACCTGCAGCACTAAATTTCTTTGTTAACTACGCCGAAGGTGTTGTTGAATCATTATGGTCCATTGATCAATACTTTGAATTTGTTCTTGTGCTGATGTTCAGTACAGGTTTATCTTTCCAGGTACCTGTCATACAATTGCTATTGGGACAACTTGGACTGGTGTCCGGAGACCAGATGCTATCAATTTGGAGGTATGTTGTGGTTGGTGCAGTAGTGGCAGCTGCCATAGTTACGCCATCCACTGATCCTCTCACTCAAATTCTTCTAGCAGCACCTTTATTGGGTCTTTACTTAGGTGGCGCATGGATGGTCAAGCTTATTGGACGGTGA 1047 0.4327 MGLVTTTVPMNVVPQFGSLRTSIRVGNSSGLSFPQSRSQKRNKSFVCFAVDDDLRPKQHDLSTTATGLGSALEERPENTDLFESKSEEMQGNFEQDGGRGAIYDFLYPSKELLPDDKEMSIFDHLEELRQRIFVSVLAVGASILGCFAFSKELIMVLEAPVKSQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFILPGLTKAERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQLGLVSGDQMLSIWRYVVVGAVVAAAIVTPSTDPLTQILLAAPLLGLYLGGAWMVKLIGR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01371 348 NCBIfam twin-arginine translocase subunit TatC 121 336 IPR002033 GO:0016020
Spst10g01371 348 Hamap Sec-independent protein translocase protein TatC [tatC]. 116 348 IPR002033 GO:0016020
Spst10g01371 348 ProSitePatterns TatC family signature. 263 282 IPR019820 -
Spst10g01371 348 PRINTS Bacterial Sec-independent translocation TatC protein family signature 194 212 IPR002033 GO:0016020
Spst10g01371 348 PRINTS Bacterial Sec-independent translocation TatC protein family signature 212 238 IPR002033 GO:0016020
Spst10g01371 348 PRINTS Bacterial Sec-independent translocation TatC protein family signature 120 147 IPR002033 GO:0016020
Spst10g01371 348 PRINTS Bacterial Sec-independent translocation TatC protein family signature 263 291 IPR002033 GO:0016020
Spst10g01371 348 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 101 348 IPR002033 GO:0016020
Spst10g01371 348 Pfam Sec-independent protein translocase protein (TatC) 123 331 IPR002033 GO:0016020
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01371 10 14159381 14163771 Spst10g01371 10 14159381 14163771 ECH