Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01370 ATGGAAGAGAGTCTCATGGAGAAGAGCAGAGAGGTGGAAGAAGGTGGTTCAGGCATAGCATGGAGTGTGTTTGGTCGAGAGGTGAAAAGGGTTGGTTATCTAGCAGGTCCTATGGTTGCTGTGACTCTGTCGCATTATTTTCTACAAATAATATCAATGATGATGGTTGGTCACTTAGGAAAGCTTGCTCTCTCCAGCACAGCCATTGCCATCTCTCTCTGTGCTGTCTCGGGCTTCAGTGTAATTTTTGGAATGTCATGTGCACTGGAAACTCAATGTGGGCAAGCGTATGGAGCAAAGCAATACAGAAAGTTTGGTGTTCAAATTTACACTGCTATTGTCTCCCTTACTTTAGCTTGTGTTCCTCTGACTCTTTTGTGGATGAACTTGGGGAAGCTGCTCATTTTACTTGGTCAAGACCCTTTGGTTTCACTAGAAGCTGGGAAATTTGCTTTATGCATGATCCCTGCTCTCTTTGCTTATGCAGCACTTCAGACCTTGGTTCGATTCTTTTTGATGCAAACTTTGATCAGTCCCCTTGTCATAAGTTCCTTCATTACTGTTAGCTTCCATGTGGCTTTCAGTTGGTTAATGGTTTTTAAATCCGGACTTGGTAACTTAGGAGCTGCCTTTTCTATTGGTACTTCGTACTGGCTCAATGTGATTTTACTTGGATTATATATGAAATTCTCTCCCGAATGTGAAAAGACTCGAGTCCCAATTTCAATAGAATTATTCCATGGGATTGGAGAATTCATCCGCTATGCCATTCCTTCAGCTGGAATGATTTGTCTTGAATGGTGGTCATTTGAGCTATTAGTCTTGCTTTCTGGACTTCTACCAAATTCAGAGTTAGAAACTTCAGTATTATCCATATGTTTAAACATCATGTCAACAATCTACACAATCCCAGAATCAATTGGCTCAGCAGCAAGCGCTAGAGTTTCAAATGCATTAGGAGGTGGAAATCCACAATCAGCACGAGTATCAGTTTATGCTGCCATGACTCTTGCAGCCTCCGAGGCCATTCTCGTGAGCTTAATCATTCTTGCAAGCAGGGAGGTTTTAGGTTATGTATTTAGCAACGAGCAGGACGTGGTGGATTATGTCACAGAAATGGCTCCTCTCTTAAGTCTTTCTGTTATACTGGACTCCTTACATGCCACCCTTTCAGGTATTGCTAGAGGATGTGGGTGGCAACACTTGGGAGCATATATAAACCTTGGAGCCTATTATGTTTTTGGAATTCCGATTGGTGCCATATTGGGTTTCTGGATGTACAAACTGGGAAATACAGGCAATTCAAGCAAGGGAAAGGATATTTCAGATGTGCAGTTGTGGAGAGTGCGAGGGTTGAAGATGGCTGTAAGATCCAAGAAAGAGAAGGAGCATCTCAATTTAGTCCTAGGTTCCCACCTCGCCACTATCCATGAAACCCTCCAGGTTTTGGACCAAACACCGCCTTCTTCTTCCACCAAAGTCACCTGGGATGATGTCATGAAGATGGGTGACCACGTTTCTAAACAAGCAACAACAGTGGGAATGCTTTGGACTGGGGAGCAGCCGGAGTCCAAAGCAATTGAGGAAAACATGGCATCATACTTCAACACTCTACAAGGTTTTCTTTTGCTTTCCCATGGTAGTACTGTAGGTGCGGGGCCTACCCTGTCTTCTGCGGTTCATGCATCTGTGAAGCAAGTGGTTGATTCCAGCTTCAGGTTGATGAAGGAAACAATCTCTTTTTATGGGTCCCATTGTAAAGACCTGAAACTATCAGTACCACAATTGGTTGGTGCTGTATGGGAAGCATGTTCTGCCCTTAAAAAGACCCCTTCCACAAATGTTACAGCAATTGGGAGAGGAATGACACAGATTGCTGTTTCAGTGAAGGACGTTCTTCGTGAGATGAAAGAATTGAAAACCGATTCATGTGATGATCCAGTTGGCAAATCCGATAGTGAGAGTTGCCCAGAAGTAGCGTCTGAGCCCAATGATGATAATTCAAGTGAAGATGATATAGGCAATGACTTGTCGCCTGAAGAAATGAAAGTGGCTGAAAGAGCCATTGAGGTTGTCTCGGATACACTTTCAGTTATTAAAGTCCTTATTCACTCCATCATTGGCTTGCTTAAGCTGGAAAAACCAAATGACAACAGCAGCTTTATAAATTCGATGGAGAAATTGTTGCAATTGTGTAAGGAACTTGGTCGACAGATTGATGAGATTGGAGCTTGCCTTTATCCCCCCCAAGAGATTCCTGCCATAACGACAGCTTCGGAGAAAATCCTCAGCATTATTGATGCTTTGCAAGTGGAGGTAGAAGAACTTCTAGGCGCATCAGATGTATTTATAGAGCCATGCAATGGCTTGAGGAGTTCACTGAGAGACCTTGCATCTGAACTAAGTAATCCTAGTACTGTTGTAGCCGGAGTAGAAAATATAACATTAACCGAAAGTAATCTCTGA 2466 0.4307 MEESLMEKSREVEEGGSGIAWSVFGREVKRVGYLAGPMVAVTLSHYFLQIISMMMVGHLGKLALSSTAIAISLCAVSGFSVIFGMSCALETQCGQAYGAKQYRKFGVQIYTAIVSLTLACVPLTLLWMNLGKLLILLGQDPLVSLEAGKFALCMIPALFAYAALQTLVRFFLMQTLISPLVISSFITVSFHVAFSWLMVFKSGLGNLGAAFSIGTSYWLNVILLGLYMKFSPECEKTRVPISIELFHGIGEFIRYAIPSAGMICLEWWSFELLVLLSGLLPNSELETSVLSICLNIMSTIYTIPESIGSAASARVSNALGGGNPQSARVSVYAAMTLAASEAILVSLIILASREVLGYVFSNEQDVVDYVTEMAPLLSLSVILDSLHATLSGIARGCGWQHLGAYINLGAYYVFGIPIGAILGFWMYKLGNTGNSSKGKDISDVQLWRVRGLKMAVRSKKEKEHLNLVLGSHLATIHETLQVLDQTPPSSSTKVTWDDVMKMGDHVSKQATTVGMLWTGEQPESKAIEENMASYFNTLQGFLLLSHGSTVGAGPTLSSAVHASVKQVVDSSFRLMKETISFYGSHCKDLKLSVPQLVGAVWEACSALKKTPSTNVTAIGRGMTQIAVSVKDVLREMKELKTDSCDDPVGKSDSESCPEVASEPNDDNSSEDDIGNDLSPEEMKVAERAIEVVSDTLSVIKVLIHSIIGLLKLEKPNDNSSFINSMEKLLQLCKELGRQIDEIGACLYPPQEIPAITTASEKILSIIDALQVEVEELLGASDVFIEPCNGLRSSLRDLASELSNPSTVVAGVENITLTESNL 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01370 821 Pfam MatE 258 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst10g01370 821 Pfam MatE 37 197 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst10g01370 821 Gene3D I/LWEQ domain 610 785 - -
Spst10g01370 821 Pfam Grap2 and cyclin-D-interacting 498 769 - -
Spst10g01370 821 CDD MATE_eukaryotic 27 426 IPR045069 GO:0042910|GO:1990961
Spst10g01370 821 NCBIfam MATE family efflux transporter 37 430 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst10g01370 821 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 429 - -
Spst10g01370 821 MobiDBLite consensus disorder prediction 641 677 - -
Spst10g01370 821 Gene3D Talin, central domain 455 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01370 Spst-Chr10 14152581 14158754 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01370 10 14152581 14158754 Spst10g01370 10 14152581 14158754 ECH