Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01368 ATGGAGGAAAGTCTACTACAAAAGCACCAAGAAGAAAGTGTGAAAAAAAGAGTAACATGGAGTGGTTTCAGTGAAGAAATGAGAAGGATCAGTGTTATAGCAGGGCCTATGGTGGTTGTGGTTTGTTCCCAGTATTTGTTGCAAGTTGTGTCAATCATGATAGTTGGTCATTTGGGTGAACTCTATCTCTCTAGCGCCGCCTTAGCAATTTCCCTTGCAGGGGTCTCTGGTTTCAGTTTACTTATGGGAATGGCTAGTGGACTAGAGACTATTTGTGGACAGGCTTTTGGAGCTCAGCAATATCAAAGGGTTGGAATGCAAACATACACTGCCATTTTCTGTCTTATATTGGTTTGTATTCCCGTGTCTGTTCTTTGGATCAACATGGAAAACATACTAGTTTTCATGGGCCAGGACCCTTTAATTTCACATGAATCAGGGAAATTCATAATTTGGCTTCTTCCAGCACTTTTTGCATATGCAATTCTGCAGCCATTAGTTCGATATTTCCAAATCCAAAGTATGCTTCTTCCCATGCTTGCAAGTTCTTGTGCCGCACTCACTGTTCATGTACCTCTTTGTTGGGTCCTGGTGTTCAAAACAAGACTGAATAATGTTGGTGGAGCATTGGCAGTTAGCATTTCAATCTGGTCAAATGTGATATTTCTTGGATTATACATGAGATACTCTTCTGCATGTGCAAAAACCCGTGCACCTATTTCTTTGGAGATTTTTAAAGGAACGTGGGAGTTCTTTCGTTTTGCTATCCCTTCCGCAGTAATGATTTGCCTTGAATGGTGGTCATATGAGCTAATGGTGTTGCTGTCAGGGCTGTTACCAAATCCACAACTTGAAACTTCAATTCTATCTGTTTGTCTAAACACCATTTCAACTCTTTATGCAATACCCTTTGGAATTGGTGCTGCAGCAAGCACAAGGGTTTCAAATGAACTAGGAGCTGGGAAAGCAAATGCTGCCCGTGTTGCTGTGTTAGCTGCAATGTCTCTTGCAGTCATTGAGACAAGTATAGTAAGCGCAACACTCTTTGCCTGTCGCCATGTTTATGGTTATATTTTCAGCAATGAGAAGGAAGTTGTTGATTATGTCACCGTCATGGCCCCTCTGGTATGTATATCTGTTATAATAGACAGCATACAAGGTGTTCTCACAGGGATTGCTAGAGGCTGTGGATGGCAACATTTAGGAGTTTATGTCAATCTGGGGGCTTTCTACCTTTGTGGGATTCCAGTGGCTGCCTTGTTGGCATTTGTGGTGGGAGTGGGAGGAAAAGGACTTTGGATTGGTATACAATGTGGTGCTTTTGTTCAAACTATTCTACTTTCTGTAATAACCGGTTCCATAAATTGGGAAAAGCAGGCCATAAAGGCAAGAAAGAGGTTATTCGATGATCAATTTTCAGCAGAAAATATATTGGTGTAG 1440 0.4153 MEESLLQKHQEESVKKRVTWSGFSEEMRRISVIAGPMVVVVCSQYLLQVVSIMIVGHLGELYLSSAALAISLAGVSGFSLLMGMASGLETICGQAFGAQQYQRVGMQTYTAIFCLILVCIPVSVLWINMENILVFMGQDPLISHESGKFIIWLLPALFAYAILQPLVRYFQIQSMLLPMLASSCAALTVHVPLCWVLVFKTRLNNVGGALAVSISIWSNVIFLGLYMRYSSACAKTRAPISLEIFKGTWEFFRFAIPSAVMICLEWWSYELMVLLSGLLPNPQLETSILSVCLNTISTLYAIPFGIGAAASTRVSNELGAGKANAARVAVLAAMSLAVIETSIVSATLFACRHVYGYIFSNEKEVVDYVTVMAPLVCISVIIDSIQGVLTGIARGCGWQHLGVYVNLGAFYLCGIPVAALLAFVVGVGGKGLWIGIQCGAFVQTILLSVITGSINWEKQAIKARKRLFDDQFSAENILV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01368 479 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 456 - -
Spst10g01368 479 NCBIfam MATE family efflux transporter 36 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst10g01368 479 CDD MATE_eukaryotic 26 462 IPR045069 GO:0042910|GO:1990961
Spst10g01368 479 Pfam MatE 257 419 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst10g01368 479 Pfam MatE 36 196 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01368 Spst-Chr10 14138215 14141446 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01368 10 14138215 14141446 Spst10g01368 10 14138215 14141446 ECH
Spst10g01368 10 14138215 14141446 Spst4g02812 4 67829690 67833982 ECH